RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PRR14LQ5THK1 2151 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 PRAMEF6Q5VXH4 476 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 SEZ6L2Q6UXD5 910 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 LYG2Q86SG7 212 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 LRP11Q86VZ4 500 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 ZBTB8BQ8NAP8 495 aaPredicted RBP12.41□□□□□ -0.42
MKS1-211ENST00000581761 SUMF2Q8NBJ7 301 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 ADAD2Q8NCV1 583 aaKnown RBP12.41□□□□□ -0.42
MKS1-211ENST00000581761 NRIP2Q9BQI9 281 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 CHIAQ9BZP6 476 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 DLL4Q9NR61 685 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 NECAP2Q9NVZ3 263 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 DUSP13Q9UII6 198 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 GPR132Q9UNW8 380 aa12.41□□□□□ -0.42
MKS1-211ENST00000581761 SPTBN1Q01082 2364 aaKnown RBP12.41□□□□□ -0.42
MKS1-211ENST00000581761 FAM172BPA6NC97 362 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 A6NLC8 198 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 HSPB6O14558 160 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 GOSR2O14653 212 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 HLA-AP01891 365 aaKnown RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 GLAP06280 429 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 RNF224P0DH78 156 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 ZNF44P15621 663 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 ZNF250P15622 560 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 AKR1C4P17516 323 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 ZBTB25P24278 435 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 CD34P28906 385 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 CA7P43166 264 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 KLF3P57682 345 aaPredicted RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 ERVK11-1P61568 191 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 DHRS2Q13268 280 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 FAHD2BQ6P2I3 314 aaPredicted RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 Q6P435 159 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 FIP1L1Q6UN15 594 aaKnown RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 POC1AQ8NBT0 407 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 FAHD2AQ96GK7 314 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 SYT3Q9BQG1 590 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 ZNF2Q9BSG1 426 aaPredicted RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 TRAF4Q9BUZ4 470 aaPredicted RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 DPCDQ9BVM2 203 aaPredicted RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 RANBP3Q9H6Z4 567 aaPredicted RBP12.4□□□□□ -0.42
MKS1-211ENST00000581761 CA10Q9NS85 328 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
MKS1-211ENST00000581761 TRAV24A0A0B4J272 114 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 OR5H14A6NHG9 310 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 CEACAM18A8MTB9 384 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 HS3ST1O14792 307 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 IGHV3-13P01766 116 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 ACAA1P09110 424 aaPredicted RBP12.39□□□□□ -0.43
MKS1-211ENST00000581761 GIPP09681 153 aaPredicted RBP12.39□□□□□ -0.43
MKS1-211ENST00000581761 OR5H8P0DN80 308 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 ECI1P42126 302 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 GLP1RP43220 463 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 RBM39Q14498 530 aaKnown RBP12.39□□□□□ -0.43
MKS1-211ENST00000581761 C2orf68Q2NKX9 166 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 AADACL3Q5VUY0 350 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 TMEM108Q6UXF1 575 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 ZNF826PQ6ZT77 177 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 SSX8Q7RTT4 187 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 PEG10Q86TG7 708 aaKnown RBP12.39□□□□□ -0.43
MKS1-211ENST00000581761 C11orf53Q8IXP5 236 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 OR2Z1Q8NG97 314 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
MKS1-211ENST00000581761 RDH5Q92781 318 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 HYLS1Q96M11 299 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 TLNRD1Q9H1K6 362 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 IFT22Q9H7X7 185 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
MKS1-211ENST00000581761 ERRFI1Q9UJM3 462 aaPredicted RBP12.39□□□□□ -0.43
MKS1-211ENST00000581761 HIVEP3Q5T1R4 2406 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 CRYBG3Q68DQ2 2970 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 A0A1B0GWJ7 208 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 C9orf170A2RU37 121 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 SIRPB1O00241 398 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 NOS1APO75052 506 aaPredicted RBP12.38□□□□□ -0.43
MKS1-211ENST00000581761 SIX6O95475 246 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 NAPSAO96009 420 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 THBDP07204 575 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 GSTT2P0CG29 244 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 DNASE1P24855 282 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 PTAFRP25105 342 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 CD200P41217 278 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 ASCL1P50553 236 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 RAP2BP61225 183 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 SURF2Q15527 256 aaPredicted RBP12.38□□□□□ -0.43
MKS1-211ENST00000581761 SRSF7Q16629 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
MKS1-211ENST00000581761 PAN3Q58A45 887 aaKnown RBP12.38□□□□□ -0.43
MKS1-211ENST00000581761 C11orf88Q6PI97 169 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 Q6ZPA2 131 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 ZFAND1Q8TCF1 268 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 TMEM171Q8WVE6 324 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 PSMG3-AS1Q96PY0 264 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 RIMS4Q9H426 269 aaPredicted RBP12.38□□□□□ -0.43
MKS1-211ENST00000581761 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 Q9N2K0 584 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 PIPOXQ9P0Z9 390 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 TAAR3PQ9P1P4 343 aa12.38□□□□□ -0.43
MKS1-211ENST00000581761 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms