RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 GPR87Q9BY21 358 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 VSIRQ9H7M9 311 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF442Q9H7R0 627 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 NECAP2Q9NVZ3 263 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 CEBPZOSA8MTT3 80 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 IGHG1P01857 330 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 HOXA6P31267 233 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 CLN3Q13286 438 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 RTP5Q14D33 572 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 TESK1Q15569 626 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 RHBDD1Q8TEB9 315 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 HSPA12AO43301 675 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 GZMBP10144 247 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 IDH3GP51553 393 aaPredicted RBP12.63□□□□□ -0.39
SCARF1-209ENST00000576012 ELLP55199 621 aaPredicted RBP12.63□□□□□ -0.39
SCARF1-209ENST00000576012 PRAMEF20Q5VT98 475 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 TMEM252Q8N6L7 170 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 ARV1Q9H2C2 271 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 PLEK2Q9NYT0 353 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 B3GAT1Q9P2W7 334 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 RALGAPA1Q6GYQ0 2036 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 PROB1E7EW31 1015 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 G3V3Y1 287 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
SCARF1-209ENST00000576012 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 A6NNC1 897 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
SCARF1-209ENST00000576012 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
SCARF1-209ENST00000576012 TMEM50AO95807 157 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF25P17030 456 aaPredicted RBP12.62□□□□□ -0.39
SCARF1-209ENST00000576012 UCP2P55851 309 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 MRPL41Q8IXM3 137 aaKnown RBP12.62□□□□□ -0.39
SCARF1-209ENST00000576012 DDIT4LQ96D03 193 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 ANAPC10Q9UM13 185 aa12.62□□□□□ -0.39
SCARF1-209ENST00000576012 A0A1W2PPQ1 181 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 C9J4A7 227 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 CHST1O43916 411 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 AMBPP02760 352 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 OR4A8P0C604 315 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 RPS16P62249 146 aaKnown RBP12.61□□□□□ -0.39
SCARF1-209ENST00000576012 COL10A1Q03692 680 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF266Q14584 549 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 SHHQ15465 462 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 SNAI3Q3KNW1 292 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 CRIP3Q6Q6R5 217 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF66Q6ZN08 573 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 FAM89BQ8N5H3 189 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 OR4X1Q8NH49 305 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
SCARF1-209ENST00000576012 LRRC61Q9BV99 259 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 IL17BQ9UHF5 180 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 A0A1B0GUS0 222 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 TNFRSF10CO14798 259 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 PMS2P11Q13670 270 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 DDA1Q9BW61 102 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 KIAA1456Q9P272 454 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 SPCS3P61009 180 aa12.61□□□□□ -0.39
SCARF1-209ENST00000576012 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 CLDN34H7C241 214 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 SCGB1D1O95968 90 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF41P51814 821 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-209ENST00000576012 THEM4Q5T1C6 240 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 NOXO1Q8NFA2 376 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 CLDND2Q8NHS1 167 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 POC1BQ8TC44 478 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 NEK7Q8TDX7 302 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 ELOVL1Q9BW60 279 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 FBLN5Q9UBX5 448 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 IGHMP01871 453 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 IAPPP10997 89 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 RPL29P47914 159 aaKnown RBP12.6□□□□□ -0.39
SCARF1-209ENST00000576012 IL13RA2Q14627 380 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 UBALD1Q8TB05 177 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 M1APQ8TC57 530 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF837Q96EG3 531 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-209ENST00000576012 HIST1H2AAQ96QV6 131 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 SYT3Q9BQG1 590 aa12.6□□□□□ -0.39
SCARF1-209ENST00000576012 PRRC2CQ9Y520 2896 aaKnown RBP12.6□□□□□ -0.39
SCARF1-209ENST00000576012 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 A8MWP6 167 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 FBLP22087 321 aaKnown RBP12.59□□□□□ -0.39
SCARF1-209ENST00000576012 CAPZBP47756 277 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 SUCLG1P53597 346 aaKnown RBP12.59□□□□□ -0.39
SCARF1-209ENST00000576012 FGF7P21781 194 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 KDF1Q8NAX2 398 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-209ENST00000576012 OR1N1Q8NGS0 311 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 OR51H1Q8NH63 302 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 METTL7AQ9H8H3 244 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 ST3GAL6Q9Y274 331 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 MUC22E2RYF6 1773 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-209ENST00000576012 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
SCARF1-209ENST00000576012 IFI6P09912 130 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 COX5BP10606 129 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 C18orf12Q96KH6 178 aa12.59□□□□□ -0.39
SCARF1-209ENST00000576012 PNRC2Q9NPJ4 139 aaKnown RBP12.59□□□□□ -0.39
SCARF1-209ENST00000576012 SPTY2D1-AS1A0A0U1RR47 76 aa12.58□□□□□ -0.4
SCARF1-209ENST00000576012 NCR3LG1Q68D85 454 aa12.58□□□□□ -0.4
SCARF1-209ENST00000576012 ZNF787Q6DD87 383 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms