RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 TCTEX1D2Q8WW35 142 aa13.5□□□□□ -0.25
NUP88-207ENST00000573584 MR1Q95460 341 aa13.5□□□□□ -0.25
NUP88-207ENST00000573584 MAGT1Q9H0U3 335 aa13.5□□□□□ -0.25
NUP88-207ENST00000573584 C11orf1Q9H5F2 150 aa13.5□□□□□ -0.25
NUP88-207ENST00000573584 PLSCR2Q9NRY7 297 aa13.5□□□□□ -0.25
NUP88-207ENST00000573584 SLC7A10Q9NS82 523 aa13.5□□□□□ -0.25
NUP88-207ENST00000573584 RBFOX3A6NFN3 312 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 ZNF724A8MTY0 619 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 NPBWR2P48146 333 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 KRTAP27-1Q3LI81 207 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 SLC25A26Q70HW3 274 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 DPPA2Q7Z7J5 298 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 TBC1D26Q86UD7 250 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 FAM185AQ8N0U4 392 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 FOXB1Q99853 325 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 ZNF700Q9H0M5 742 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 WNT5BQ9H1J7 359 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 PLEKHF2Q9H8W4 249 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 SH2D2AQ9NP31 389 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 SSSCA1O60232 199 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 IFNA17P01571 189 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 KLK3P07288 261 aaPredicted RBP13.49□□□□□ -0.25
NUP88-207ENST00000573584 ZNF468Q5VIY5 522 aaPredicted RBP13.49□□□□□ -0.25
NUP88-207ENST00000573584 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 TMEM171Q8WVE6 324 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 HS3ST3B1Q9Y662 390 aa13.49□□□□□ -0.25
NUP88-207ENST00000573584 ZNF816-ZNF321PA0A0X1KG74 233 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 PITX3O75364 302 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 EIF2S3P41091 472 aaKnown RBP13.48□□□□□ -0.25
NUP88-207ENST00000573584 RGS19P49795 217 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 CEACAM16Q2WEN9 425 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 CXorf66Q5JRM2 361 aaPredicted RBP13.48□□□□□ -0.25
NUP88-207ENST00000573584 M1APQ8TC57 530 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 TMEM56Q96MV1 263 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 FSCN3Q9NQT6 498 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 TMEM56-RWDD3S4R434 201 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 HSPA12AO43301 675 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 DNPH1O43598 174 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 CLN5O75503 358 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 FGF5P12034 268 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 VAMP2P63027 116 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 DAZAP2Q15038 168 aaPredicted RBP13.48□□□□□ -0.25
NUP88-207ENST00000573584 C5orf24Q7Z6I8 188 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 TMEM252Q8N6L7 170 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 SPIN2AQ99865 258 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 SPIN2BQ9BPZ2 258 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 SLC25A31Q9H0C2 315 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 LYRM2Q9NU23 88 aaPredicted RBP13.48□□□□□ -0.25
NUP88-207ENST00000573584 MIOXQ9UGB7 285 aa13.48□□□□□ -0.25
NUP88-207ENST00000573584 CACNA1EQ15878 2313 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 ZNF716A6NP11 495 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 KLF7O75840 302 aaPredicted RBP13.47□□□□□ -0.25
NUP88-207ENST00000573584 CEBPGP53567 150 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 SPSB3Q6PJ21 355 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 OR5C1Q8NGR4 320 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 SAP25Q8TEE9 199 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 EXTL1Q92935 676 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 GPHA2Q96T91 129 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 FAM86C1Q9NVL1 165 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 ZNF587BE7ETH6 402 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 ADAM20O43506 726 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 CST7O76096 145 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 TK1P04183 234 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 MAS1LP35410 378 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 B3GALT5-AS1P59052 145 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 PCBD1P61457 104 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 RND3P61587 244 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 IL11RAQ14626 422 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 HIKESHIQ53FT3 197 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 HEPN1Q6WQI6 88 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 SELENOHQ8IZQ5 122 aaKnown RBP13.47□□□□□ -0.25
NUP88-207ENST00000573584 OR51M1Q9H341 326 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 UNKLQ9H9P5 680 aaKnown RBP13.47□□□□□ -0.25
NUP88-207ENST00000573584 PARPBPQ9NWS1 579 aa13.47□□□□□ -0.25
NUP88-207ENST00000573584 H3BQ15 152 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 RPL36A-HNRNPH2H7BZ11 118 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 CXCL13O43927 109 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 HAGHQ16775 308 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 C1QL4Q86Z23 238 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 TMEM217Q8N7C4 229 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 EDN3P14138 238 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 RPS10P46783 165 aaKnown RBP13.46□□□□□ -0.25
NUP88-207ENST00000573584 MLF1P58340 268 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 STARD6P59095 220 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 NCMAPQ5T1S8 102 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 ZNF818PQ6ZRF7 136 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 GAPTQ8N292 157 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 AGBL5Q8NDL9 886 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 YPEL4Q96NS1 127 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 TECTBQ96PL2 329 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 GLRX2Q9NS18 164 aa13.46□□□□□ -0.25
NUP88-207ENST00000573584 TRAV20A0A0B4J274 112 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 CCDC163A0A0D9SF12 145 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 A0A0G2JMM0 328 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 A0A1W2PPB8 328 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 A0A1W2PRS3 328 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 BTBD17A6NE02 478 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms