RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 FBXO24O75426 580 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 ALX3O95076 343 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 CYB5AP00167 134 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 KISS1Q15726 138 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 OXLD1Q5BKU9 147 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 XAF1Q6GPH4 301 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 ZFP1Q6P2D0 407 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 TRAPPC6BQ86SZ2 158 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 SYS1Q8N2H4 156 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 OR51A2Q8NGJ7 313 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 OR52I1Q8NGK6 324 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 MRPS18AQ9NVS2 196 aaKnown RBP14.48□□□□□ -0.09
CHD3-214ENST00000572579 DPM3Q9P2X0 92 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 PITPNC1Q9UKF7 332 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 ORC6Q9Y5N6 252 aa14.48□□□□□ -0.09
CHD3-214ENST00000572579 KIAA2026Q5HYC2 2103 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 TRAV24A0A0B4J272 114 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 SH2D7A6NKC9 451 aaPredicted RBP14.47□□□□□ -0.09
CHD3-214ENST00000572579 LIMS3P0CW19 117 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 LIMS4P0CW20 117 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 CD34P28906 385 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 SMN1Q16637 294 aaKnown RBP14.47□□□□□ -0.09
CHD3-214ENST00000572579 FAM118AQ9NWS6 357 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 TAS2R3Q9NYW6 316 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 GLS2Q9UI32 602 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 SIRT4Q9Y6E7 314 aaPredicted RBP14.47□□□□□ -0.09
CHD3-214ENST00000572579 PLXNB1O43157 2135 aa14.47□□□□□ -0.09
CHD3-214ENST00000572579 TRGV10A0A0A0MS01 117 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 LOC100130705A0A1B0GUX0 176 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 DEGS1O15121 323 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 SULT1B1O43704 296 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 WBP4O75554 376 aaKnown RBP14.46□□□□□ -0.09
CHD3-214ENST00000572579 CSN2P05814 226 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 TMEM225BP0DP42 221 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 ZNF44P15621 663 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 CD83Q01151 205 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 ATXN7L3Q14CW9 347 aaPredicted RBP14.46□□□□□ -0.09
CHD3-214ENST00000572579 KRBOX4Q5JUW0 171 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 ZNF691Q5VV52 312 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 C10orf99Q6UWK7 81 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 Q6ZPA2 131 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 NDUFA11Q86Y39 141 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 SERPINA12Q8IW75 414 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 NEK6Q9HC98 313 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 S100A14Q9HCY8 104 aa14.46□□□□□ -0.09
CHD3-214ENST00000572579 A0A087X0M5 115 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 A0A1B0GX30 115 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 BUB1B-PAK6H3BSN5 160 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 RAB40BQ12829 278 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 LPCAT4Q643R3 524 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 ELP2Q6IA86 826 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 ZBTB49Q6ZSB9 765 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 RTN4RL2Q86UN3 420 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 DTX3Q8N9I9 347 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 Q8NFD4 153 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 OR51T1Q8NGJ9 327 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 OR5D14Q8NGL3 314 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 OR10K1Q8NGX5 313 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 OR5AK2Q8NH90 309 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 RHOFQ9HBH0 211 aa14.45□□□□□ -0.1
CHD3-214ENST00000572579 TMEM212A6NML5 194 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 GABRPO00591 440 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 HSPB6O14558 160 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 FADS2O95864 444 aaKnown RBP14.44□□□□□ -0.1
CHD3-214ENST00000572579 HCKP08631 526 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 OCM2P0CE71 109 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 OCMP0CE72 109 aaPredicted RBP14.44□□□□□ -0.1
CHD3-214ENST00000572579 VDAC2P45880 294 aaPredicted RBP14.44□□□□□ -0.1
CHD3-214ENST00000572579 EMX1Q04741 257 aaPredicted RBP14.44□□□□□ -0.1
CHD3-214ENST00000572579 DIAPH2-AS1Q14236 149 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 ZSCAN26Q16670 478 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 HLA-DRB5Q30154 266 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 TPTE2P1Q5T6R2 138 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 ASCL4Q6XD76 172 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 CHST4Q8NCG5 386 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 OR5AU1Q8NGC0 362 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 OR13A1Q8NGR1 328 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 ORAI1Q96D31 301 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 R3HDM4Q96D70 268 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 KIRREL1Q96J84 757 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 NR1H4Q96RI1 486 aaPredicted RBP14.44□□□□□ -0.1
CHD3-214ENST00000572579 C9orf16Q9BUW7 83 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 GAL3ST2Q9H3Q3 398 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 INPP5EQ9NRR6 644 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 TAS2R4Q9NYW5 299 aa14.44□□□□□ -0.1
CHD3-214ENST00000572579 TRAV39A0A0B4J263 110 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 KBTBD11-OT1A0A1B0GTJ5 212 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 SNTNA6NMZ2 147 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 LEUTXA8MZ59 168 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 IGHV3-7P01780 117 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 PTGFRP43088 359 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 SOX2P48431 317 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 ETV1P50549 477 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 PIGYQ3MUY2 71 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 OR52W1Q6IF63 320 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 PQLC1Q8N2U9 271 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 PXT1Q8NFP0 134 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 CNIH3Q8TBE1 160 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 PLPPR1Q8TBJ4 325 aa14.43□□□□□ -0.1
CHD3-214ENST00000572579 ZNF596Q8TC21 504 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms