RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 TRAPPC2BP0DI82 140 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 PMELP40967 661 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 OR3A3P47888 321 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ZNF81P51508 661 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 TAS2R46P59540 309 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ACTBL2Q562R1 376 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 OVCH2Q7RTZ1 564 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 OR11H7Q8NGC8 314 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 LRRC29Q8WV35 223 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 CNTNAP3BQ96NU0 1288 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 CNTNAP3Q9BZ76 1288 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ABCA4P78363 2273 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 MCRIP1C9JLW8 97 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 DEGS1O15121 323 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 IGHV1-46P01743 117 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 NPY4RP50391 375 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 UBE2MP61081 183 aaKnown RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 SSX8Q7RTT4 187 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 MOGAT3Q86VF5 341 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 MARCH1Q8TCQ1 289 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 SLC25A21Q9BQT8 299 aaPredicted RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 LIME1Q9H400 295 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 CHMP1AQ9HD42 196 aaPredicted RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 SLC33A1O00400 549 aaPredicted RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 PTBP3O95758 552 aaKnown RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 NAPSAO96009 420 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 CXCL3P19876 107 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ARPC4P59998 168 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 TLE1Q04724 770 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ZNF146Q15072 292 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ACP7Q6ZNF0 438 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 MED28Q9H204 178 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 PPA2Q9H2U2 334 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 ESRP2Q9H6T0 727 aaKnown RBP9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 RHOFQ9HBH0 211 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 KCNJ16Q9NPI9 418 aa9.22□□□□□ -0.93
PDXDC1-216ENST00000569715 PRSS44E7EML9 344 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 E7EQL1 145 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 ZG16O60844 167 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 ACAA1P09110 424 aaPredicted RBP9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 GLRA1P23415 457 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 SELENOVP59797 346 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 TSPAN5P62079 268 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 BAMBIQ13145 260 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 AADACL3Q5VUY0 350 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 ARRDC1Q8N5I2 433 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 TMPRSS13Q9BYE2 586 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 IFT22Q9H7X7 185 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 NGBQ9NPG2 151 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 ZNF69Q9UC07 566 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 DCHS2Q6V1P9 2916 aa9.21□□□□□ -0.93
PDXDC1-216ENST00000569715 PRAF2O60831 178 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 HAND1O96004 215 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 CDK10Q15131 360 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 ZMYND11Q15326 602 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 PAN3Q58A45 887 aaKnown RBP9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 METTL11BQ5VVY1 283 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 TGIF2LYQ8IUE0 185 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 PLPPR1Q8TBJ4 325 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 TREM2Q9NZC2 230 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 FLNCQ14315 2725 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 OR5H14A6NHG9 310 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 SSNA1O43805 119 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 GSTT2P0CG29 244 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 LHFPL1Q86WI0 220 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 BOLLQ8N9W6 283 aaKnown RBP9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 ADAD2Q8NCV1 583 aaKnown RBP9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 OR5T2Q8NGG2 359 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 TERB2Q8NHR7 220 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 MRPL30Q8TCC3 161 aaKnown RBP9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 SPACA1Q9HBV2 294 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 NDRG3Q9UGV2 375 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 EDARQ9UNE0 448 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 KIAA2026Q5HYC2 2103 aa9.21□□□□□ -0.94
PDXDC1-216ENST00000569715 ARFGEF3Q5TH69 2177 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 TRAV39A0A0B4J263 110 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 PSPNO60542 156 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 IL5P05113 134 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 PI3P19957 117 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 ATXN7L3Q14CW9 347 aaPredicted RBP9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 SPIN3Q5JUX0 258 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 FAM201AQ5SY85 155 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF626Q68DY1 528 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 GCSAMQ8N6F7 178 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF286AQ9HBT8 521 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 DYSFO75923 2080 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 TUBAL3A6NHL2 446 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 SMLR1H3BR10 107 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 TNFAIP6P98066 277 aaPredicted RBP9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 MZT1Q08AG7 82 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 IGSF11Q5DX21 431 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 ZNF660Q6AZW8 331 aaPredicted RBP9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 MUC20Q8N307 709 aaPredicted RBP9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 Q9N2K0 584 aa9.2□□□□□ -0.94
PDXDC1-216ENST00000569715 IGHV3OR15-7A0A075B7D8 119 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms