RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 GTPBP8Q8N3Z3 284 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 SVOPLQ8N434 492 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 LRRC18Q8N456 261 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ARFGAP2Q8N6H7 521 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 C10orf53Q8N6V4 93 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 RNF148Q8N7C7 305 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CDRT4Q8N9R6 151 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SYT14Q8NB59 555 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 C19orf18Q8NEA5 215 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GPR32P1Q8NGA4 272 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR4F17Q8NGA8 305 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR52P1PQ8NH57 321 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR51A7Q8NH64 312 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR5W2Q8NH69 310 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR10A6Q8NH74 314 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR2V1Q8NHB1 315 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 AKR7LQ8NHP1 331 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PFN4Q8NHR9 129 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ZNF563Q8TA94 476 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ZNF675Q8TD23 568 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ACMSDQ8TDX5 336 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ZFP90Q8TF47 636 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR5P2Q8WZ92 322 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GTF2H4Q92759 462 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 YIPF5Q969M3 257 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TAMM41Q96BW9 452 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ROPN1LQ96C74 230 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TLCD1Q96CP7 247 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NEURL3Q96EH8 262 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FAHD2AQ96GK7 314 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TPD52L3Q96J77 140 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FCRL1Q96LA6 429 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 OR4F4Q96R69 305 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PANX1Q96RD7 426 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 STACQ99469 402 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CCL19Q99731 98 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SH3GL3Q99963 347 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TMEM109Q9BVC6 243 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 REG4Q9BYZ8 158 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 GPR61Q9BZJ8 451 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ROPN1BQ9BZX4 212 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 SLC38A1Q9H2H9 487 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 PIGUQ9H490 435 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 COQ10BQ9H8M1 238 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 WDR76Q9H967 626 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MEAF6Q9HAF1 191 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ROPN1Q9HAT0 212 aaPredicted RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 TPT1P8Q9HAU6 139 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NOX3Q9HBY0 568 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SDHAF3Q9NRP4 125 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ACER3Q9NUN7 267 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.86□□□□□ -2.27
SMG1-212ENST00000566328 NMRK1Q9NWW6 199 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MED29Q9NX70 200 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 DCAF16Q9NXF7 216 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ZNF226Q9NYT6 803 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TAS2R5Q9NYW4 299 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ADA2Q9NZK5 511 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 KCNN3Q9UGI6 736 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 FETUBQ9UGM5 382 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 LGALS13Q9UHV8 139 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 BTNL2Q9UIR0 455 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 MCTS1Q9ULC4 181 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 TMCO1Q9UM00 188 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 ANGPT4Q9Y264 503 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 CFL2Q9Y281 166 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 NOSIPQ9Y314 301 aaKnown RBP0.86□□□□□ -2.27
SMG1-212ENST00000566328 N6AMT1Q9Y5N5 214 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 SLC25A15Q9Y619 301 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 AP4B1Q9Y6B7 739 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 USH1CQ9Y6N9 552 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 V9GYQ6 96 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 TANC2Q9HCD6 1990 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 STARD9Q9P2P6 4700 aa0.86□□□□□ -2.27
SMG1-212ENST00000566328 DNAH1Q9P2D7 4330 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 WNK1Q9H4A3 2382 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 VPS13DQ5THJ4 4388 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 TRAV27A0A087WT01 109 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 UQCRHLA0A096LP55 91 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A096LPI6 279 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 IGHV1-18A0A0C4DH31 117 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A1B0GWA3 101 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A1W2PP18 115 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A1W2PRD5 423 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A1W2PRF3 423 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A1W2PRM7 423 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A0A1W2PRQ8 180 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 A6NIN4 97 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR6C65A6NJZ3 312 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ZNF726A6NNF4 738 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 TMEM114B3SHH9 223 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C5orf58C9J3I9 102 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C11orf94C9JXX5 98 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FTCDNL1E5RQL4 147 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 H0YL77 283 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 H3BNH8 94 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 TRAPPC2LH3BP13 241 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 H3BQF6 201 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 H3BSH0 61 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 hCG_2039718K7EN88 272 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms