RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 J3QT63 122 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 TNFRSF13BO14836 293 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-206ENST00000565990 RHBDL1O75783 438 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 AKAIN1P0CW23 69 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 HAAOP46952 286 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 PDLIM4P50479 330 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 ZP1P60852 638 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 ERVK11-1P61568 191 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 PDZK1IP1Q13113 114 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 GRK1Q15835 563 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 CLEC12BQ2HXU8 276 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 HAGHLQ6PII5 290 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-206ENST00000565990 ZNF826PQ6ZT77 177 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 GCSAMQ8N6F7 178 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 NKAIN3Q8N8D7 197 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
SF3B3-206ENST00000565990 OR11L1Q8NGX0 322 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 CCDC107Q8WV48 283 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 NUDT16L1Q9BRJ7 211 aaKnown RBP10.6□□□□□ -0.71
SF3B3-206ENST00000565990 UFSP2Q9NUQ7 469 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 DCAF16Q9NXF7 216 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 RNF7Q9UBF6 113 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 NUP50Q9UKX7 468 aa10.6□□□□□ -0.71
SF3B3-206ENST00000565990 TEX15Q9BXT5 2789 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 LEUTXA8MZ59 168 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 SYNGR1O43759 233 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 CXCL3P19876 107 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 RAB6AP20340 208 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 ZNF93P35789 620 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-206ENST00000565990 RBMXP38159 391 aaKnown RBP10.59□□□□□ -0.71
SF3B3-206ENST00000565990 RAB11BQ15907 218 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 LGALSLQ3ZCW2 172 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-206ENST00000565990 NLRC3Q7RTR2 1065 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 C1orf87Q8N0U7 546 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 Q8NFD4 153 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 NPRL2Q8WTW4 380 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 FAM168AQ92567 244 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 SLC25A21Q9BQT8 299 aaPredicted RBP10.59□□□□□ -0.71
SF3B3-206ENST00000565990 RHOFQ9HBH0 211 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 RASL12Q9NYN1 266 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 MTCH1Q9NZJ7 389 aa10.59□□□□□ -0.71
SF3B3-206ENST00000565990 NOTCH2Q04721 2471 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 A0A0B4J203 849 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 A6NLC8 198 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 SRRM5B3KS81 715 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-206ENST00000565990 CYB5R3P00387 301 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-206ENST00000565990 MAS1P04201 325 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 HCKP08631 526 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 PGA5P0DJD9 388 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 PTGFRP43088 359 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 VEGFCP49767 419 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 GMFBP60983 142 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 Q5PR19 223 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 C1orf100Q5SVJ3 147 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 TEX36Q5VZQ5 186 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 RAB12Q6IQ22 244 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 LPCAT3Q6P1A2 487 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 CLEC2AQ6UVW9 174 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 MKXQ8IYA7 352 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 TMEM229BQ8NBD8 167 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 POC1AQ8NBT0 407 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 PXT1Q8NFP0 134 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 OR11H4Q8NGC9 324 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 OR6M1Q8NGM8 313 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 LRRC29Q8WV35 223 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 RAB1CQ92928 201 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 DACT3Q96B18 629 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-206ENST00000565990 CPNE2Q96FN4 548 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-206ENST00000565990 SPACA5Q96QH8 159 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 NRIP2Q9BQI9 281 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 UQCC2Q9BRT2 126 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 METTL17Q9H7H0 456 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-206ENST00000565990 MGAT4CQ9UBM8 478 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 POLDIP2Q9Y2S7 368 aa10.58□□□□□ -0.72
SF3B3-206ENST00000565990 OTOGQ6ZRI0 2925 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 IGKV1-12A0A0C4DH73 117 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 A0A1B0GW55 424 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 ARPC1BO15143 372 aaKnown RBP10.57□□□□□ -0.72
SF3B3-206ENST00000565990 KDM4BO94953 1096 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 IGKV1D-12P01611 117 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 IGHV2-70P01814 119 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 DUX4L2P0CJ85 424 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 DUX4L3P0CJ86 424 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 DUX4L4P0CJ87 422 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 DUX4L5P0CJ88 424 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 DUX4L6P0CJ89 424 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 DUX4L7P0CJ90 424 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 IRF2P14316 349 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 MUC1P15941 1255 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-206ENST00000565990 PRSS3P35030 304 aa10.57□□□□□ -0.72
SF3B3-206ENST00000565990 TAS2R19P59542 299 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms