RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 GABRG2P18507 467 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 GFERP55789 205 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 DAOAP59103 153 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 KDSRQ06136 332 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 STX5Q13190 355 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 FLOT2Q14254 428 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF829Q3KNS6 432 aaPredicted RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 Q3ZCU0 254 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 N4BP2L1Q5TBK1 243 aaPredicted RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 NCBP2-AS2Q69YL0 99 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 IZUMO2Q6UXV1 221 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 PID1Q7Z2X4 250 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ARPINQ7Z6K5 226 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 OR10W1Q8NGF6 305 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 DDI1Q8WTU0 396 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 MITD1Q8WV92 249 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 LZICQ8WZA0 190 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 L3HYPDHQ96EM0 354 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 CPB2Q96IY4 423 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 OR10C1Q96KK4 312 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 SERPINB11Q96P15 392 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 PEBP4Q96S96 227 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 MRPL57Q9BQC6 102 aaKnown RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 THTPAQ9BU02 230 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 EFCAB1Q9HAE3 211 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 FBXO6Q9NRD1 293 aaPredicted RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 TAS2R1Q9NYW7 299 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 HMGXB4Q9UGU5 601 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ACOT9Q9Y305 439 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 CCL15-CCL14A0A0B4J2E2 113 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 C7orf66A4D0T2 115 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 KRBOX1C9JBD0 128 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 NDUFC2-KCTD14E9PQ53 114 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MFSD11O43934 449 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MPDU1O75352 247 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 FARS2O95363 451 aaKnown RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 SMIM10L2AP0DMW4 78 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 SMIM10L2BP0DMW5 78 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MSR1P21757 451 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MAGEA12P43365 314 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 PPICP45877 212 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 CXCL12P48061 93 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 NUDT2P50583 147 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 RPL14P50914 215 aaKnown RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 TAS2R31P59538 309 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 DNAJB13P59910 316 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 ZBTB6Q15916 424 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 CCL15Q16663 113 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 ACSBG2Q5FVE4 666 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 SHISA6Q6ZSJ9 500 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 BHLHA15Q7RTS1 189 aaPredicted RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 FAM9CQ8IZT9 166 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 DEFB106AQ8N104 65 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 TMEM256Q8N2U0 113 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 UBAC2Q8NBM4 344 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 PROKR2Q8NFJ6 384 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 OR52P1PQ8NH57 321 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 LINC01560Q8TB33 94 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 NAT6Q93015 286 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 ROPN1LQ96C74 230 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 KLF6Q99612 283 aaPredicted RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 GPR22Q99680 433 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 TBL1YQ9BQ87 522 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 GGTLC1Q9BX51 225 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 SAMD10Q9BYL1 202 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 NAA50Q9GZZ1 169 aaKnown RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 FBXO44Q9H4M3 255 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 RGCCQ9H4X1 137 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 POPDC3Q9HBV1 291 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MARCOQ9UEW3 520 aaPredicted RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 GINS2Q9Y248 185 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF835Q9Y2P0 537 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 AP3M1Q9Y2T2 418 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 COL4A4P53420 1690 aaPredicted RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MYLKQ15746 1914 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 GREB1Q4ZG55 1949 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 CHD5Q8TDI0 1954 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 SERPINE3A8MV23 424 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 SLC16A7O60669 478 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 BANF1O75531 89 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 CNMDO75829 334 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 CCNKO75909 580 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 TGM6O95932 706 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 COX4I1P13073 169 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 ME2P23368 584 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 HTR1DP28221 377 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 MYCNOSP40205 109 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 BCAP31P51572 246 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 AP1S2P56377 157 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 RPL10AP62906 217 aaKnown RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 BNIP2Q12982 314 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 HNRNPA1L2Q32P51 320 aaKnown RBP2.74□□□□□ -1.97
LINC00560-201ENST00000564593 COX19Q49B96 90 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 COQ5Q5HYK3 327 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 FAM45BPQ6NSW5 357 aa2.74□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF880Q6PDB4 577 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms