RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 MFSD1Q9H3U5 465 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 SND1-IT1Q9HBX3 110 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 INSIG2Q9Y5U4 225 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 TICRRQ7Z2Z1 1910 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ZCCHC11Q5TAX3 1644 aaKnown RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 ABCB11O95342 1321 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 TTC21AQ8NDW8 1320 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 RAD50Q92878 1312 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 FRMPD1Q5SYB0 1578 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 C1orf232A0A0U1RR37 186 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 RBFOX3A6NFN3 312 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 GOLGA8MH3BSY2 632 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 FABP7O15540 132 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 OR7C2O60412 319 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 MED6O75586 246 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ZNF189O75820 626 aaPredicted RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 AHSA1O95433 338 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 RLN2P04090 185 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 MAS1P04201 325 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 SNRPAP09012 282 aaKnown RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 KDELR2P33947 212 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 GDI2P50395 445 aaKnown RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 TAS2R43P59537 309 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 RAB31Q13636 194 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 EBI3Q14213 229 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ABCA11PQ4W5N1 156 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 TIMM23BQ5SRD1 257 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 FAM104BQ5XKR9 115 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 LAMTOR1Q6IAA8 161 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 GLYATQ6IB77 296 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 UNQ9165/PRO28630Q6UXU0 137 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 SSX7Q7RTT5 188 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 CRLF3Q8IUI8 442 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ZNF555Q8NEP9 628 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 OR8J2Q8NGG1 315 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 OR52N1Q8NH53 320 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 DYNC2LI1Q8TCX1 351 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ZNF514Q96K75 400 aaPredicted RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 NDEL1Q9GZM8 345 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 SRRQ9GZT4 340 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 DSN1Q9H410 356 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 C21orf62Q9NYP8 219 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 PUS1Q9Y606 427 aaKnown RBP eCLIP1.54□□□□□ -2.16
CHD9-209ENST00000564255 ABCA9Q8IUA7 1624 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ELP1O95163 1332 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 LOXHD1Q8IVV2 1947 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 NOS1P29475 1434 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ISPDA4D126 451 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 GOLGA8IPA6NC78 632 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 PGPA6NDG6 321 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 FFAR1O14842 300 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 HLA-DRAP01903 254 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 CDK1P06493 297 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 NTF3P20783 257 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 CBX5P45973 191 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 LGALS7P47929 136 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 RWDD2BP57060 319 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 POLR2GP62487 172 aaKnown RBP eCLIP1.53□□□□□ -2.16
CHD9-209ENST00000564255 SKP1P63208 163 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 EIF4EBP1Q13541 118 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 CASP8Q14790 479 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 SP6Q3SY56 376 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 LUZP6Q538Z0 58 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 FAM231DQ6ZW35 169 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 USP50Q70EL3 339 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 STX12Q86Y82 276 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 BOD1L2Q8IYS8 172 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 SLC26A10Q8NG04 563 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 OR2Z1Q8NG97 314 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 OR5AK3PQ8NH89 298 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 TBL1XR1Q9BZK7 514 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 LHX5Q9H2C1 402 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 NKIRAS1Q9NYS0 192 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 RBM12B-AS1Q9P1G2 102 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 FBXL3Q9UKT7 428 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 TIMM22Q9Y584 194 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 POLR3AO14802 1390 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 KDM5CP41229 1560 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 ZNF142P52746 1687 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 NRCAMQ92823 1304 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 ALKQ9UM73 1620 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 IGKV2D-24A0A075B6R9 120 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 LOC102724200A0A096LPH7 203 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 MYBPHLA2RUH7 354 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 SMLR1H3BR10 107 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 ITGB1BP1O14713 200 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 SYNGR1O43759 233 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 UGT2B11O75310 529 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 DHRS3O75911 302 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 TNFAIP8O95379 198 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 WISP3O95389 354 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 CYB5R3P00387 301 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 ITGB3BPQ13352 177 aaPredicted RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 FAM183BPQ6ZVS7 135 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 OR9A2Q8NGT5 310 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 ACTL9Q8TC94 416 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 RNASEH2CQ8TDP1 164 aaKnown RBP1.53□□□□□ -2.16
CHD9-209ENST00000564255 PPP1R14BQ96C90 147 aa1.53□□□□□ -2.16
CHD9-209ENST00000564255 OPTNQ96CV9 577 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms