RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 F2RL1P55085 397 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 CEACAM21Q3KPI0 293 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 DCAF10Q5QP82 559 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 MEX3BQ6ZN04 569 aaKnown RBP17.18■□□□□ 0.34
MSLN-205ENST00000563941 LINC00696Q6ZRV3 163 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 CBLN2Q8IUK8 224 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 TMEM251Q8N6I4 163 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 SLC35G3Q8N808 338 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 HS3ST6Q96QI5 342 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 ARV1Q9H2C2 271 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 ZDHHC8Q9ULC8 765 aa17.18■□□□□ 0.34
MSLN-205ENST00000563941 TNRC6AQ8NDV7 1962 aaKnown RBP17.17■□□□□ 0.34
MSLN-205ENST00000563941 C3orf85A0A1B0GTC6 90 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 ID4P47928 161 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 NPBWR1P48145 328 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 NOVA1P51513 510 aaKnown RBP17.17■□□□□ 0.34
MSLN-205ENST00000563941 Q6ZS49 121 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 APH1AQ96BI3 265 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 TMED3Q9Y3Q3 217 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 LNP1A1A4G5 178 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 ZNF732B4DXR9 585 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 C21orf140B9A014 251 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 MPPED1O15442 326 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 ST8SIA3O43173 380 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 H2AFB1P0C5Y9 115 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 P2RY1P47900 373 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 PLGLB1Q02325 96 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 IL13RA2Q14627 380 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 SWI5Q1ZZU3 235 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 GPR157Q5UAW9 335 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 DHRS7BQ6IAN0 325 aaPredicted RBP17.17■□□□□ 0.34
MSLN-205ENST00000563941 WFDC1Q9HC57 220 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 Q9N2K0 584 aa17.17■□□□□ 0.34
MSLN-205ENST00000563941 BORCS7-ASMTA0A0B4J1R7 106 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 ZNF724A8MTY0 619 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 SFTA3P0C7M3 94 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 RAB1AP62820 205 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 C5orf24Q7Z6I8 188 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 DPPA2Q7Z7J5 298 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 FAM185AQ8N0U4 392 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 FAM212BQ9NTI7 297 aaPredicted RBP17.16■□□□□ 0.34
MSLN-205ENST00000563941 MTCH1Q9NZJ7 389 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 IL36RNQ9UBH0 155 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 NDRG3Q9UGV2 375 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 RCL1Q9Y2P8 373 aaKnown RBP17.16■□□□□ 0.34
MSLN-205ENST00000563941 NCOR1O75376 2440 aa17.16■□□□□ 0.34
MSLN-205ENST00000563941 SS18L1O75177 396 aaPredicted RBP17.15■□□□□ 0.34
MSLN-205ENST00000563941 NAPSAO96009 420 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 NGFP01138 241 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 CD5P06127 495 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 GLAP06280 429 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 OR8U9P0C7N5 309 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 GNRHRP30968 328 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 TMEM164Q5U3C3 297 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 OR4D5Q8NGN0 318 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 OR8U1Q8NH10 309 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 CD80P33681 288 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 ARR3P36575 388 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 SRPXP78539 464 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 C3AR1Q16581 482 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 SRSF7Q16629 238 aaKnown RBP eCLIP17.15■□□□□ 0.34
MSLN-205ENST00000563941 DMBX1Q8NFW5 382 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 POM121L2Q96KW2 1035 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 PARP12Q9H0J9 701 aaKnown RBP17.15■□□□□ 0.34
MSLN-205ENST00000563941 TMEM222Q9H0R3 208 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 ZNF552Q9H707 407 aaPredicted RBP17.15■□□□□ 0.34
MSLN-205ENST00000563941 RNF122Q9H9V4 155 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 POMT1Q9Y6A1 747 aa17.15■□□□□ 0.34
MSLN-205ENST00000563941 TRAPPC2LH3BP13 241 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 HSPB6O14558 160 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 TK1P04183 234 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 SCTP09683 121 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 MPV17LQ2QL34 196 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 HFEQ30201 348 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 TBC1D26Q86UD7 250 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 MKXQ8IYA7 352 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 LYPD6BQ8NI32 183 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 SECTM1Q8WVN6 248 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 GINS3Q9BRX5 216 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 TRDCB7Z8K6 153 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 PRSS44E7EML9 344 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 SEC11BP0C7V7 166 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 PVALBP20472 110 aaPredicted RBP17.14■□□□□ 0.33
MSLN-205ENST00000563941 KCNJ3P48549 501 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 FLI1Q01543 452 aaPredicted RBP17.14■□□□□ 0.33
MSLN-205ENST00000563941 SPIN3Q5JUX0 258 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 NUFIP2Q7Z417 695 aaKnown RBP17.14■□□□□ 0.33
MSLN-205ENST00000563941 AHCTF1Q8WYP5 2266 aa17.14■□□□□ 0.33
MSLN-205ENST00000563941 USB1Q9BQ65 265 aaKnown RBP17.14■□□□□ 0.33
MSLN-205ENST00000563941 NKX2-6A6NCS4 301 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 H7C2Y5 167 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 DVL1P1P54792 670 aaPredicted RBP17.13■□□□□ 0.33
MSLN-205ENST00000563941 NHLH2Q02577 135 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 PLP2Q04941 152 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 TSC22D1Q15714 1073 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 ZNF565Q8N9K5 539 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 NEK7Q8TDX7 302 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 UBE2J1Q9Y385 318 aaPredicted RBP17.13■□□□□ 0.33
MSLN-205ENST00000563941 ZNF407Q9C0G0 2248 aa17.13■□□□□ 0.33
MSLN-205ENST00000563941 CD300LBA8K4G0 201 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms