RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TM2D3Q9BRN9 247 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 TTTY10Q9BZA0 68 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 PRRG3Q9BZD7 231 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 RIBC2Q9H4K1 309 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 Q9H521 79 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 SEBOXQ9HB31 216 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-204ENST00000563739 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 POLDIP2Q9Y2S7 368 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 ORC6Q9Y5N6 252 aa8.09□□□□□ -1.11
SF3B3-204ENST00000563739 A0A087X0M5 115 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 A0A1B0GX30 115 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 hADV38S2A0JD32 116 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 MAGEA13PA6NCF6 341 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 PRR23D1E9PI22 279 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-204ENST00000563739 BUB1B-PAK6H3BSN5 160 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 M0R129 80 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 MAGEB4O15481 346 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-204ENST00000563739 PRR23D2P0DMB1 279 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-204ENST00000563739 CDK2P24941 298 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 NPBWR2P48146 333 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 P2RX3P56373 397 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 RAB25P57735 213 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 ROM1Q03395 351 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 KIAA0141Q14154 515 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-204ENST00000563739 DOC2BQ14184 412 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 C17orf58Q2M2W7 97 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 CLVS2Q5SYC1 327 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 ZNF684Q5T5D7 378 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 C12orf73Q69YU5 71 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 PLBD1Q6P4A8 553 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 ZBTB49Q6ZSB9 765 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 GDPD3Q7L5L3 318 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 CHPT1Q8WUD6 406 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 SLAMF9Q96A28 289 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 OTULINQ96BN8 352 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 COQ2Q96H96 371 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 OR51V1Q9H2C8 321 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 TVP23BQ9NYZ1 205 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 ENPP5Q9UJA9 477 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 SMAD5-AS1Q9Y6J3 95 aa8.08□□□□□ -1.12
SF3B3-204ENST00000563739 DNAH6Q9C0G6 4158 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 TMEM269A0A1B0GVZ9 245 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 ACOD1A6NK06 481 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 TRIM64CA6NLI5 447 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 DLGAP1O14490 977 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 PRODHO43272 600 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 PRKYO43930 277 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 ENTPD6O75354 484 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 HAND1O96004 215 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 CGB3P0DN86 165 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 CGB7P0DN87 165 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 CCL1P22362 96 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 DUSP1P28562 367 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 BRS3P32247 399 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 POLR2IP36954 125 aaKnown RBP8.07□□□□□ -1.12
SF3B3-204ENST00000563739 KIR2DS1Q14954 304 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 UBE2V2Q15819 145 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 GRK1Q15835 563 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 PLEKHG7Q6ZR37 379 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 CPOQ8IVL8 374 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 Q8N6K4 173 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 OR5M8Q8NGP6 311 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 OR56B4Q8NH76 319 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 TRMT10AQ8TBZ6 339 aaKnown RBP8.07□□□□□ -1.12
SF3B3-204ENST00000563739 CORO2AQ92828 525 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 CEP19Q96LK0 163 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 MBOAT4Q96T53 435 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 RBFOX1Q9NWB1 397 aaKnown RBP8.07□□□□□ -1.12
SF3B3-204ENST00000563739 UBE2J1Q9Y385 318 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-204ENST00000563739 VPS13DQ5THJ4 4388 aa8.07□□□□□ -1.12
SF3B3-204ENST00000563739 LEUTXA8MZ59 168 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 M0QZK8 103 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 FGF16O43320 207 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 INMTO95050 263 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 CALCBP10092 127 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 ERP29P30040 261 aaKnown RBP8.06□□□□□ -1.12
SF3B3-204ENST00000563739 CDX1P47902 265 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-204ENST00000563739 GLIPR1P48060 266 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 ZNF146Q15072 292 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 ZIK1Q3SY52 487 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-204ENST00000563739 ZNF260Q3ZCT1 412 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 SLC35D3Q5M8T2 416 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 LCN1P1Q5VSP4 162 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 FAM53AQ6NSI3 398 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-204ENST00000563739 RTN4RL2Q86UN3 420 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 THNSL2Q86YJ6 484 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.06□□□□□ -1.12
SF3B3-204ENST00000563739 TCEANCQ8N8B7 351 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 OR8U1Q8NH10 309 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 TMEM163Q8TC26 289 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 ITFG2Q969R8 447 aa8.06□□□□□ -1.12
SF3B3-204ENST00000563739 ZMAT5Q9UDW3 170 aaKnown RBP8.06□□□□□ -1.12
SF3B3-204ENST00000563739 IGKV1-12A0A0C4DH73 117 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 SERPINE3A8MV23 424 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 CCRL2O00421 344 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 MGST3O14880 152 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 IGKV1D-12P01611 117 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 MRPL3P09001 348 aaKnown RBP8.05□□□□□ -1.12
SF3B3-204ENST00000563739 GPR12P47775 334 aa8.05□□□□□ -1.12
SF3B3-204ENST00000563739 GP2P55259 537 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms