RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 C11orf54Q9H0W9 315 aaPredicted RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 GLS2Q9UI32 602 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 ZNF230Q9UIE0 474 aaPredicted RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 ZNF222Q9UK12 451 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 DOPEY2Q9Y3R5 2298 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 UTP20O75691 2785 aaKnown RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 OOEPA6NGQ2 149 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 IFNL4K9M1U5 179 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 PSPNO60542 156 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 LY6HO94772 140 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 ECDO95905 644 aaPredicted RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 GSTT2BP0CG30 244 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 NAT1P18440 290 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 DEFA1P59665 94 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 DEFA3P59666 94 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 ACTBP60709 375 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 ACTG1P63261 375 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 RGS21Q2M5E4 152 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 PAN3Q58A45 887 aaKnown RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 STUMQ69YW2 141 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 C1orf87Q8N0U7 546 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 ANGPTL6Q8NI99 470 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 PLPPR1Q8TBJ4 325 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 SETD6Q8TBK2 473 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 NEU4Q8WWR8 484 aaPredicted RBP8.51□□□□□ -1.05
SMG1-208ENST00000563448 IGFBPL1Q8WX77 278 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 MAFIPQ8WZ33 124 aa8.51□□□□□ -1.05
SMG1-208ENST00000563448 PPIAL4EA0A075B759 164 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 PPIAL4DF5H284 164 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 OVOL3O00110 214 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 LYRM1O43325 122 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 SSX4O60224 188 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 CSF1P09603 554 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 PPIAL4FP0DN26 164 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 MUC1P15941 1255 aaPredicted RBP8.5□□□□□ -1.05
SMG1-208ENST00000563448 RCVRNP35243 200 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 CBX5P45973 191 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 GABRA2P47869 451 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 RBM39Q14498 530 aaKnown RBP8.5□□□□□ -1.05
SMG1-208ENST00000563448 MICBQ29980 383 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 HFEQ30201 348 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 SHEQ5VZ18 495 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 OR52W1Q6IF63 320 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 C17orf107Q6ZR85 190 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 HOGA1Q86XE5 327 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 TMEM229BQ8NBD8 167 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 DEFB108BQ8NET1 73 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 OR4S1Q8NGB4 309 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 NEK7Q8TDX7 302 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 SNAPC3Q92966 411 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 COX4I2Q96KJ9 171 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 SHARPINQ9H0F6 387 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 PPA2Q9H2U2 334 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 HRASLSQ9HDD0 168 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 IFT46Q9NQC8 304 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 TAS2R8Q9NYW2 309 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 PPIAL4AQ9Y536 164 aa8.5□□□□□ -1.05
SMG1-208ENST00000563448 YLPM1P49750 1951 aaKnown RBP8.5□□□□□ -1.05
SMG1-208ENST00000563448 IGKV1D-8A0A087WSZ0 117 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 LGALS8O00214 317 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 NDUFS7O75251 213 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 ZNF737O75373 536 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 RP2O75695 350 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 NAPSAO96009 420 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 GYPAP02724 150 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 MT-ND4P03905 459 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 CD3DP04234 171 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 FCGR3AP08637 254 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 HLA-DMAP28067 261 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 BTCP35070 178 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 OR3A1P47881 315 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 RFX2P48378 723 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 TAS2R19P59542 299 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 MRPS15P82914 257 aaKnown RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 DYRK1AQ13627 763 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 ATXN7L3Q14CW9 347 aaPredicted RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 FAAP20Q6NZ36 180 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 GDPD3Q7L5L3 318 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 ZNF554Q86TJ5 538 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 MRPL30Q8TCC3 161 aaKnown RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 GAFA1Q96PS6 74 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 ST6GALNAC5Q9BVH7 336 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 CHST6Q9GZX3 395 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 TMEM165Q9HC07 324 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 ZNF701Q9NV72 531 aaPredicted RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 ZNF107Q9UII5 783 aaPredicted RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 MAB21L2Q9Y586 359 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 TENM4Q6N022 2769 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 TRAV38-1A0A0B4J264 116 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 A0A1B0GW55 424 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 TNFRSF13BO14836 293 aaPredicted RBP8.49□□□□□ -1.05
SMG1-208ENST00000563448 CD74P04233 296 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4L2P0CJ85 424 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4L3P0CJ86 424 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4L4P0CJ87 422 aa8.49□□□□□ -1.05
SMG1-208ENST00000563448 DUX4L5P0CJ88 424 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms