RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 KPNB1Q14974 876 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 C17orf58Q2M2W7 97 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 HLA-DRB5Q30154 266 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TPTE2P1Q5T6R2 138 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 Q6P435 159 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR13C9Q8NGT0 318 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CAPSLQ8WWF8 208 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OSBPL10Q9BXB5 764 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 NBEAL2Q6ZNJ1 2754 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RYR3Q15413 4870 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FUOMA2VDF0 154 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SLC33A1O00400 549 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SLC16A6O15403 523 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FCGR1AP12314 374 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ZNF44P15621 663 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CCR9P51686 369 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ARHGDIBP52566 201 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 KRTAP10-11P60412 298 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SCN1BQ07699 218 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ATXN7L3Q14CW9 347 aaPredicted RBP13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 KRBOX4Q5JUW0 171 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 C1orf146Q5VVC0 180 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 KCTD20Q7Z5Y7 419 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR4X2Q8NGF9 303 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR13C3Q8NGS6 347 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RNFT2Q96EX2 444 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RCC1LQ96I51 464 aaKnown RBP13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 INPP5EQ9NRR6 644 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ING3Q9NXR8 418 aa13.28□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 DAPL1A0PJW8 107 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 SAC3D1A6NKF1 404 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OR4C45A6NMZ5 311 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 TOR1AO14656 332 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 HTR1AP08908 422 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OCM2P0CE71 109 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OCMP0CE72 109 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CEACAM3P40198 252 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OR3A4PP47883 348 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CDK5R1Q15078 307 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 KHDC1LQ5JSQ8 128 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 SAXO1Q8IYX7 474 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CHST4Q8NCG5 386 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OR4D6Q8NGJ1 314 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CREB3L1Q96BA8 519 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 PELI1Q96FA3 418 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 PCDHGB5Q9Y5G0 923 aa13.27□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 ZNF729A6NN14 1252 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 PRRX1P54821 245 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 ZP1P60852 638 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 RBM39Q14498 530 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 C9orf152Q5JTZ5 239 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OSR2Q8N2R0 312 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 TRUB1Q8WWH5 349 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 KIRREL1Q96J84 757 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 C4orf36Q96KX1 117 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 RHOFQ9HBH0 211 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 NEK6Q9HC98 313 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 IMPAD1Q9NX62 359 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 MYRFQ9Y2G1 1151 aa13.26□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 KBTBD11-OT1A0A1B0GTJ5 212 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 WI2-2373I1.2A0A1W2PRP0 233 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A18PA6NE21 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A16PA6NEW6 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A20PA6NIJ5 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A9PA6NNJ1 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A12PA8MX19 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A5PA8MXJ8 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OOSP1A8MZH6 123 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 J3QLW9 94 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 DEGS1O15121 323 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A15PP0C7V4 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A13PP0C7W8 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A14PP0C7W9 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM90A24PP0C7X0 464 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CGB3P0DN86 165 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 CGB7P0DN87 165 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 ZNF19P17023 458 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 NFYBP25208 207 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 MNDAP41218 407 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 ALKBH1Q13686 389 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 SLC25A30Q5SVS4 291 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 ETV3LQ6ZN32 361 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 LINC00482Q8N8I6 264 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 OR51T1Q8NGJ9 327 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 HRASLS5Q96KN8 279 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 ZCCHC4Q9H5U6 513 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 KIAA2026Q5HYC2 2103 aa13.25□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 E9PQ18 207 aa13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 M0QZK8 103 aa13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 HSPB6O14558 160 aa13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 DUS4LO95620 317 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 IGHV3-7P01780 117 aa13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 HCKP08631 526 aa13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 HOXD3P31249 432 aaPredicted RBP13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 SNRPGP62308 76 aaKnown RBP13.24□□□□□ -0.29
VPS9D1-AS1-201ENST00000562298 EGFEM1PQ0D2K5 195 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms