RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 IL22RA2Q969J5 263 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 MMP25Q9NPA2 562 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 EMC9Q9Y3B6 208 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 ARID1BQ8NFD5 2236 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-206ENST00000561781 ZNF732B4DXR9 585 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 H7BYZ3 331 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 B3GALT2O43825 422 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 PITX3O75364 302 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CSTAP01040 98 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 ASAH2BP0C7U1 165 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 DRD3P35462 400 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CXCL12P48061 93 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 COX15Q7KZN9 410 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 TMEM123Q8N131 208 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 NECAP1Q8NC96 275 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 RNF2Q99496 336 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 RAB11FIP5Q9BXF6 653 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 TBL1XR1Q9BZK7 514 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CALHM2Q9HA72 323 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 GNG13Q9P2W3 67 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 NAT8Q9UHE5 227 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 SLC45A2Q9UMX9 530 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 OR1A2Q9Y585 309 aa16.24■□□□□ 0.19
RAB40C-206ENST00000561781 CRYM-AS1A6NIL9 109 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 DLL1O00548 723 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 SDCBPO00560 298 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-206ENST00000561781 BCL2P10415 239 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 RPS20P60866 119 aaKnown RBP16.23■□□□□ 0.19
RAB40C-206ENST00000561781 GNMTQ14749 295 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 SCARF2Q96GP6 870 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-206ENST00000561781 MRPL22Q9NWU5 206 aaKnown RBP16.23■□□□□ 0.19
RAB40C-206ENST00000561781 RNF115Q9Y4L5 304 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 TMEM14DPA8MWL7 114 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 EPHA8P29322 1005 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-206ENST00000561781 CSNK2A1P68400 391 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-206ENST00000561781 PAFAH1B2P68402 229 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 FOXK1P85037 733 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 C1orf210Q8IVY1 113 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 WDFY1Q8IWB7 410 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 CSNK2A3Q8NEV1 391 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 OR4B1Q8NGF8 309 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 OR56B2PQ8NGI1 322 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 C8orf44Q96CB5 159 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 SLC7A11Q9UPY5 501 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 LAMTOR2Q9Y2Q5 125 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 RFNGQ9Y644 331 aa16.23■□□□□ 0.19
RAB40C-206ENST00000561781 ABCA7Q8IZY2 2146 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 M0QZ24 198 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 CNOT4O95628 575 aaKnown RBP16.22■□□□□ 0.19
RAB40C-206ENST00000561781 PRNPP04156 253 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 CTSDP07339 412 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-206ENST00000561781 PLAC9Q5JTB6 97 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 C1orf140Q5VVS0 124 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 ADAMTSL4Q6UY14 1074 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 DGAT2L6Q6ZPD8 337 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 SLC5A6Q9Y289 635 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 WIPI2Q9Y4P8 454 aa16.22■□□□□ 0.19
RAB40C-206ENST00000561781 A0A0A6YYD4 124 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 GPR89AB7ZAQ6 455 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 DDAH2O95865 285 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 ISG15P05161 165 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 GPR89BP0CG08 455 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 TCN2P20062 427 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 DUSP1P28562 367 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 MTCP1P56278 107 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 ADIRFQ15847 76 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 OCIAD2Q56VL3 154 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 CST9LP1Q5W188 147 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 OR2T10Q8NGZ9 312 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 SMIM12Q96EX1 92 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 IGHV2OR16-5A0A0B4J2B6 119 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 LAMTOR5O43504 91 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 OR6A2O95222 327 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 BMP5P22003 454 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 P2RY2P41231 377 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 TPPP2P59282 170 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 ZNF141Q15928 474 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 PRSS8Q16651 343 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 OGFOD3Q6PK18 319 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 LIPHQ8WWY8 451 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 ABHD6Q9BV23 337 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 LPAR5Q9H1C0 372 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 UQCR10Q9UDW1 63 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 PRSS50Q9UI38 385 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 PPIAL4AQ9Y536 164 aa16.21■□□□□ 0.19
RAB40C-206ENST00000561781 TRAV30A0A087WSZ9 112 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 LOC101059948A0A1B0GTJ6 334 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 SEMA4FO95754 770 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 H2BFMP0C1H6 154 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 EGR4Q05215 589 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 ARFRP1Q13795 201 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 ZNF776Q68DI1 518 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-206ENST00000561781 LHFPL4Q7Z7J7 247 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 TMEM256Q8N2U0 113 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 ARHGEF39Q8N4T4 335 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 OR2C3Q8N628 320 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 CMTM2Q8TAZ6 248 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 TOMM40LQ969M1 308 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 CTHRC1Q96CG8 243 aa16.2■□□□□ 0.18
RAB40C-206ENST00000561781 LRFN3Q9BTN0 628 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms