RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ZNF345Q14585 488 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 WDR73Q6P4I2 378 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 OR10G8Q8NGN5 311 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 BCL2L2Q92843 193 aaPredicted RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 ANXA10Q9UJ72 324 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 ICE1Q9Y2F5 2266 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 ALG1L2C9J202 215 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 PDCD6O75340 191 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 DTD1Q8TEA8 209 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 APOBEC3DQ96AK3 386 aaPredicted RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 TMEM147Q9BVK8 224 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 SIRT7Q9NRC8 400 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 BCORQ6W2J9 1755 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 SSC5DA1L4H1 1573 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 CXorf65A6NEN9 183 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 HLA-GP17693 338 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 SLC25A30Q5SVS4 291 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 C16orf82Q7Z2V1 217 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 LDLRAD3Q86YD5 345 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 SARGQ9BW04 601 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 KIAA1456Q9P272 454 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 VAX2Q9UIW0 290 aa9.02□□□□□ -0.96
GTF3C1-202ENST00000561623 B4DEV8 164 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 OR1L4Q8NGR5 311 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 ST6GALNAC2Q9UJ37 374 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 FZR1Q9UM11 496 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 TTC3P53804 2025 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 NKX2-6A6NCS4 301 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 MBPP02686 304 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 RBP4P02753 201 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 OPRK1P41145 380 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 SUMO3P55854 103 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 TCTAP57738 103 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 SPCS3P61009 180 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 SMIM21Q3B7S5 101 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 RGS7BPQ6MZT1 257 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 OR2V1Q8NHB1 315 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 WNT16Q9UBV4 365 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 SERGEFQ9UGK8 458 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 SLC45A2Q9UMX9 530 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 KLF13Q9Y2Y9 288 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 LRP5O75197 1615 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 C9orf172C9J069 976 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 PAGE4O60829 102 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 TRGC2P03986 189 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 IER3P46695 156 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 GAMTQ14353 236 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 TRAT1Q6PIZ9 186 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 MISP3Q96FF7 219 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 MANBALQ9NQG1 85 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 OR5AC2Q9NZP5 309 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 TAAR3PQ9P1P4 343 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 RREB1Q92766 1687 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 CYC1P08574 325 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 FBP1P09467 338 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 CEBPDP49716 269 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 HIST3H3Q16695 136 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 SPACA9Q96E40 222 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 AKIRIN1Q9H9L7 192 aaPredicted RBP9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 LPAR2Q9HBW0 351 aa9.02□□□□□ -0.97
GTF3C1-202ENST00000561623 OR4C45A6NMZ5 311 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 RHOBP62745 196 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF547Q8IVP9 402 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 GAPTQ8N292 157 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 LILRB1Q8NHL6 650 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 ZPLD1Q8TCW7 415 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM171Q8WVE6 324 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 NUP214P35658 2090 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF32P17041 273 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 G6PCP35575 357 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 OR11G2Q8NGC1 345 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 WDR61Q9GZS3 305 aaKnown RBP9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 GPR27Q9NS67 375 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 MMP17Q9ULZ9 603 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 STARD10Q9Y365 291 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 Q5BKY6 102 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM196Q5HYL7 178 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM255AQ5JRV8 349 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 DEGS2Q6QHC5 323 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 CYB561D1Q8N8Q1 229 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 OR1K1Q8NGR3 316 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 FGF11Q92914 225 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 MVB12AQ96EY5 273 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 GNRHR2Q96P88 292 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 PPIL1Q9Y3C6 166 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 A0A1B0GV90 55 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 SYNGR2O43760 224 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 VN1R4Q7Z5H5 301 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 WASHC3Q9Y3C0 194 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 NANOS3P60323 173 aaKnown RBP9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 GNG3P63215 75 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 ZNF141Q15928 474 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 WIPI1Q5MNZ9 446 aaPredicted RBP9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 OR2A5Q96R48 311 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 TMEM204Q9BSN7 226 aa9.01□□□□□ -0.97
GTF3C1-202ENST00000561623 ONECUT1Q9UBC0 465 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms