RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SLC22A5O76082 557 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 GSTT2P0CG29 244 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 MDH2P40926 338 aaKnown RBP10.92□□□□□ -0.66
SNX1-211ENST00000560829 H2BFSP57053 126 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 IL13RA1P78552 427 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 ZNF880Q6PDB4 577 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 WDR82Q6UXN9 313 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 GAPTQ8N292 157 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 OR2T35Q8NGX2 323 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 LIME1Q9H400 295 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 CHMP1AQ9HD42 196 aaPredicted RBP10.92□□□□□ -0.66
SNX1-211ENST00000560829 DUSP13Q9UII6 198 aa10.92□□□□□ -0.66
SNX1-211ENST00000560829 KIR2DS1A0A191URI9 304 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 TMEM8BA6NDV4 472 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 SLC34A2O95436 690 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 OR2H2O95918 312 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 ZNF44P15621 663 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 AKR1C4P17516 323 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 DNASE1P24855 282 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 LMO1P25800 156 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 CD34P28906 385 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 CFHR2P36980 270 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 KIR2DS4P43632 304 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 KIR2DS1Q14954 304 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 FBXL19-AS1Q494R0 122 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 PRAMEF6Q5VXH4 476 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 LAMTOR1Q6IAA8 161 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 FIP1L1Q6UN15 594 aaKnown RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 KDF1Q8NAX2 398 aaPredicted RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 OR11H4Q8NGC9 324 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 MRPL30Q8TCC3 161 aaKnown RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 RDH5Q92781 318 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 PHB2Q99623 299 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 OPN4Q9UHM6 478 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 ATP23Q9Y6H3 246 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 TLN1Q9Y490 2541 aaKnown RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 A0A0B4J2A0 478 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 ZSCAN5BA6NJL1 495 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 C3orf80F5H4A9 247 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 SLC33A1O00400 549 aaPredicted RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 GOSR2O14653 212 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 HS3ST1O14792 307 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 SH2D1BO14796 132 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 RGS11O94810 467 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 SFT2D2O95562 160 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 CTSDP07339 412 aaPredicted RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 RPS2P15880 293 aaKnown RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 ASCL1P50553 236 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 UCP3P55916 312 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 IFITM2Q01629 132 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 SRSF4Q08170 494 aaKnown RBP10.91□□□□□ -0.66
SNX1-211ENST00000560829 LY6G6FQ5SQ64 297 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 ZNF826PQ6ZT77 177 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 C9orf62Q8N4C0 152 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 UXS1Q8NBZ7 420 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 OR5M8Q8NGP6 311 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 OR10Z1Q8NGY1 313 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 NEK7Q8TDX7 302 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 CHIAQ9BZP6 476 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 SHPKQ9UHJ6 478 aa10.91□□□□□ -0.66
SNX1-211ENST00000560829 DSPP15924 2871 aaKnown RBP10.9□□□□□ -0.66
SNX1-211ENST00000560829 IGHV3-64DA0A0J9YX35 117 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 FAM172BPA6NC97 362 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 DPRXA6NFQ7 191 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 A6NLC8 198 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 DBX1A6NMT0 343 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 TRDCB7Z8K6 153 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 H7C1Q1 480 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 HSPB6O14558 160 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 GLRA1P23415 457 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 VAMP1P23763 118 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 GLP1RP43220 463 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 SELENOVP59797 346 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 SUPT4H1P63272 117 aaKnown RBP10.9□□□□□ -0.66
SNX1-211ENST00000560829 BAMBIQ13145 260 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 WFDC8Q8IUA0 241 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 PRR7Q8TB68 274 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 MRPL24Q96A35 216 aaKnown RBP10.9□□□□□ -0.66
SNX1-211ENST00000560829 MRPL37Q9BZE1 423 aaKnown RBP10.9□□□□□ -0.66
SNX1-211ENST00000560829 FXYD6Q9H0Q3 95 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 TMEM165Q9HC07 324 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 PLSCR3Q9NRY6 295 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 MGAT4AQ9UM21 535 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 C14orf166Q9Y224 244 aaKnown RBP10.9□□□□□ -0.66
SNX1-211ENST00000560829 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
SNX1-211ENST00000560829 PLSCR5A0PG75 271 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 RGS13O14921 159 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 HAND1O96004 215 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 KNG1P01042 644 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 CTXN2P0C2S0 81 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 PGAM2P15259 253 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 FCGR2CP31995 323 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 PAN3Q58A45 887 aaKnown RBP10.89□□□□□ -0.67
SNX1-211ENST00000560829 Q5BKY6 102 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 DCAF12L2Q5VW00 463 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 C11orf88Q6PI97 169 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
SNX1-211ENST00000560829 CLEC18BQ6UXF7 455 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms