RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 OR2AT4A6NND4 320 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 PPIAL4DF5H284 164 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 RFPL4AL1F8VTS6 287 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 F8VVB4 439 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 F8VWA3 439 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 LGALS8O00214 317 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 MFNGO00587 321 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 NDUFA2O43678 99 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 ORC5O43913 435 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 OR2H2O95918 312 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 HAND1O96004 215 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 LHBP01229 141 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 CD8AP01732 235 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 SOD3P08294 240 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 PPIAL4FP0DN26 164 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 LMO1P25800 156 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 COL8A1P27658 744 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 DUSP1P28562 367 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 PRDX2P32119 198 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 GDNFP39905 211 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 GABRA2P47869 451 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 TAS2R19P59542 299 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 DGCR2P98153 550 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 DYRK1AQ13627 763 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 BAK1Q16611 211 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 RGS21Q2M5E4 152 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 ACTBL2Q562R1 376 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 RNASE12Q5GAN4 147 aaKnown RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 PLAC9Q5JTB6 97 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 STEAP3Q658P3 488 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 C11orf71Q6IPW1 123 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 BRICD5Q6PL45 260 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 DNM1P46Q6ZS02 220 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 C6orf201Q7Z4U5 140 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 TRAPPC6BQ86SZ2 158 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 BIVMQ86UB2 503 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 LYSMD2Q8IV50 215 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 ZCCHC24Q8N2G6 241 aaKnown RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 GCSAMQ8N6F7 178 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 POC5Q8NA72 575 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 MINDY2Q8NBR6 621 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 OR5D13Q8NGL4 314 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 GPX8Q8TED1 209 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 ST8SIA4Q92187 359 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 RDH5Q92781 318 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 YIPF5Q969M3 257 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 SEH1LQ96EE3 360 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 TIMD4Q96H15 378 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 MED30Q96HR3 178 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 SDHCQ99643 169 aaPredicted RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 OCSTAMPQ9BR26 566 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 FAAP24Q9BTP7 215 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 DPCDQ9BVM2 203 aaPredicted RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 CACNG6Q9BXT2 260 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 CHST6Q9GZX3 395 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 ZMAT3Q9HA38 289 aaKnown RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 CHMP1AQ9HD42 196 aaPredicted RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 MYOZ1Q9NP98 299 aaPredicted RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 C12orf4Q9NQ89 552 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 ZNF701Q9NV72 531 aaPredicted RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 BEX4Q9NWD9 120 aaPredicted RBP5.41□□□□□ -1.54
SPG11-221ENST00000560299 ETAA1Q9NY74 926 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 TREM2Q9NZC2 230 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 KLK11Q9UBX7 282 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 MGAT4AQ9UM21 535 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 WIPI2Q9Y4P8 454 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 PPIAL4AQ9Y536 164 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 CSMD2Q7Z408 3487 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 CSMD1Q96PZ7 3565 aa5.41□□□□□ -1.54
SPG11-221ENST00000560299 RAI1Q7Z5J4 1906 aaPredicted RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 AKAP6Q13023 2319 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 LINC00854A0A1B0GVQ3 168 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 ANKRD20A5PA0PJZ0 165 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 MEIOCA2RUB1 952 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 FOXI3A8MTJ6 420 aaPredicted RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 ZNF736B4DX44 427 aaPredicted RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 TMEM178BH3BS89 294 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 SIRPB1O00241 398 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 WNT9BO14905 357 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 LYRM1O43325 122 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 FSTL3O95633 263 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 CYB5R3P00387 301 aaPredicted RBP5.4□□□□□ -1.54
SPG11-221ENST00000560299 IFNA6P05013 189 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 AKAIN1P0CW23 69 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 PSG2P11465 335 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 PTHLHP12272 177 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 TBPP20226 339 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 DTYMKP23919 212 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 OR3A3P47888 321 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 TMEM33P57088 247 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 TAS2R46P59540 309 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 ASAH1Q13510 395 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 MEF2DQ14814 521 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 PDCD1Q15116 288 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 XP32Q5T750 250 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 SHEQ5VZ18 495 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 TEX36Q5VZQ5 186 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 SIGIRRQ6IA17 410 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 Q6P435 159 aa5.4□□□□□ -1.54
SPG11-221ENST00000560299 MOB1BQ7L9L4 216 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms