RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 INMT-MINDY4F8WBC2 141 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 H7C2Y5 167 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 J3QT63 122 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 M0R129 80 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 WRBO00258 174 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 FABP7O15540 132 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 LYRM1O43325 122 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 ENTPD6O75354 484 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 ZNF205O95201 554 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 LHBP01229 141 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 TTRP02766 147 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 S100A8P05109 93 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 PSMA1P25786 263 aaKnown RBP7.23□□□□□ -1.25
USP3-208ENST00000558285 CD80P33681 288 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 CCR9P51686 369 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 FUT6P51993 359 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 SPRNQ5BIV9 151 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 FAM76BQ5HYJ3 339 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 STX12Q86Y82 276 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 ENTHD1Q8IYW4 607 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 GCSAMQ8N6F7 178 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 ZNF676Q8N7Q3 588 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 ZSCAN4Q8NAM6 433 aaPredicted RBP7.23□□□□□ -1.25
USP3-208ENST00000558285 SCCPDHQ8NBX0 429 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 UXS1Q8NBZ7 420 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 DVL3Q92997 716 aaPredicted RBP7.23□□□□□ -1.25
USP3-208ENST00000558285 SLC25A46Q96AG3 418 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 BORCS8Q96FH0 119 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 TTTY10Q9BZA0 68 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 NLKQ9UBE8 527 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 MRM2Q9UI43 246 aaKnown RBP7.23□□□□□ -1.25
USP3-208ENST00000558285 HHLA2Q9UM44 414 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 V9GYS6 101 aa7.23□□□□□ -1.25
USP3-208ENST00000558285 TRBV23-1A0A0A0MS06 115 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 TMEM212A6NML5 194 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 KIAA1324LA8MWY0 1029 aaPredicted RBP7.22□□□□□ -1.25
USP3-208ENST00000558285 TSC22D2O75157 780 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 NXPH2O95156 264 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 GYPAP02724 150 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 CD2P06729 351 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 FAHP16930 419 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 CCL1P22362 96 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 PMELP40967 661 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 CAPZA1P52907 286 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ATP1B3P54709 279 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 RELBQ01201 579 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 PAX8Q06710 450 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 FGL1Q08830 312 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ATPAF1Q5TC12 328 aaPredicted RBP7.22□□□□□ -1.25
USP3-208ENST00000558285 HAGHLQ6PII5 290 aaPredicted RBP7.22□□□□□ -1.25
USP3-208ENST00000558285 REC114Q7Z4M0 266 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 BCDIN3DQ7Z5W3 292 aaKnown RBP7.22□□□□□ -1.25
USP3-208ENST00000558285 CATSPERDQ86XM0 798 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 MKXQ8IYA7 352 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 STPG2Q8N412 459 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ARL6IP6Q8N6S5 226 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 PPP1R35Q8TAP8 253 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 THRSPQ92748 146 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 GGHQ92820 318 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 PHF21AQ96BD5 680 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 SPSB1Q96BD6 273 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 UPRTQ96BW1 309 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 MGLLQ99685 303 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 SOSTQ9BQB4 213 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ZNF251Q9BRH9 671 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ALG8Q9BVK2 526 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 PKIBQ9C010 78 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 OR51I2Q9H344 312 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 SAV1Q9H4B6 383 aaPredicted RBP7.22□□□□□ -1.25
USP3-208ENST00000558285 COPZ2Q9P299 210 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ZNF319Q9P2F9 582 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 SCP2D1Q9UJQ7 156 aa7.22□□□□□ -1.25
USP3-208ENST00000558285 ZNF879B4DU55 563 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 J3QLW9 94 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 AIPO00170 330 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 DVL1O14640 695 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 TOX4O94842 621 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 BPNT1O95861 308 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 IGLV3-1P01715 115 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 ISG15P05161 165 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 FGF2P09038 288 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 CLEC2LP0C7M8 214 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 SLC2A2P11168 524 aaPredicted RBP7.21□□□□□ -1.25
USP3-208ENST00000558285 ZNF19P17023 458 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 ACKR3P25106 362 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.25
USP3-208ENST00000558285 GABRA2P47869 451 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 TGM4P49221 684 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 RBP2P50120 134 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 HILS1P60008 231 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 ACTG1P63261 375 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 DHODHQ02127 395 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 MFGE8Q08431 387 aaPredicted RBP7.21□□□□□ -1.25
USP3-208ENST00000558285 TP53I3Q53FA7 332 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 PYDC2Q56P42 97 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 NHLRC3Q5JS37 347 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 NCR3LG1Q68D85 454 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 FDX2Q6P4F2 183 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 ZNF826PQ6ZT77 177 aa7.21□□□□□ -1.25
USP3-208ENST00000558285 LAX1Q8IWV1 398 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms