RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 ZNF574Q6ZN55 896 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-231ENST00000557433 OR2AE1Q8NHA4 323 aa14.07□□□□□ -0.16
SHMT2-231ENST00000557433 EDARADDQ8WWZ3 215 aa14.07□□□□□ -0.16
SHMT2-231ENST00000557433 TMEM38BQ9NVV0 291 aa14.07□□□□□ -0.16
SHMT2-231ENST00000557433 GAR1Q9NY12 217 aaKnown RBP14.07□□□□□ -0.16
SHMT2-231ENST00000557433 A0A0C4DFX4 3053 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF816-ZNF321PA0A0X1KG74 233 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 hCG_38984A0A1B0GV85 526 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF724A8MTY0 619 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 RPL36A-HNRNPH2H7BZ11 118 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 GPR37O15354 613 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 DFFBO76075 338 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 SCAF4O95104 1147 aaKnown RBP14.06□□□□□ -0.16
SHMT2-231ENST00000557433 TK1P04183 234 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 CTXN2P0C2S0 81 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 VDAC1P21796 283 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 CLDN15P56746 228 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 ID3Q02535 119 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 IL24Q13007 206 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 COL19A1Q14993 1142 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 SELENOHQ8IZQ5 122 aaKnown RBP14.06□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF700Q9H0M5 742 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF442Q9H7R0 627 aa14.06□□□□□ -0.16
SHMT2-231ENST00000557433 BCAT2O15382 392 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-231ENST00000557433 SLC34A2O95436 690 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 GLIPR1P48060 266 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 ELOBQ15370 118 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 IGSF11Q5DX21 431 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 MRPL14Q6P1L8 145 aaKnown RBP14.05□□□□□ -0.16
SHMT2-231ENST00000557433 ZFP62Q8NB50 900 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-231ENST00000557433 WSB1Q9Y6I7 421 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 ZIC3O60481 467 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 UCP1P25874 307 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 GNRHRP30968 328 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 RAC3P60763 192 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 PNRC1Q12796 327 aaPredicted RBP14.05□□□□□ -0.16
SHMT2-231ENST00000557433 ICAM4Q14773 271 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 PCOLCEQ15113 449 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 NCMAPQ5T1S8 102 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF774Q6NX45 483 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 TBC1D26Q86UD7 250 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 SAXO1Q8IYX7 474 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 IL22RA1Q8N6P7 574 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 OR5C1Q8NGR4 320 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 UCN2Q96RP3 112 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 ATP5SQ99766 215 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 TMEM242Q9NWH2 141 aa14.05□□□□□ -0.16
SHMT2-231ENST00000557433 UNC13CQ8NB66 2214 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 PROB1E7EW31 1015 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 SLC25A6P12236 298 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 CCL20P78556 96 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 DLK1P80370 383 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 NMSQ5H8A3 153 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 RIPPLY2Q5TAB7 128 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 PLCXD3Q63HM9 321 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 AKR7LQ8NHP1 331 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 DYRK2Q92630 601 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 SLAMF9Q96A28 289 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 DUSP23Q9BVJ7 150 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF581Q9P0T4 197 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 DOK5Q9P104 306 aa14.04□□□□□ -0.16
SHMT2-231ENST00000557433 MRPS17Q9Y2R5 130 aaKnown RBP14.04□□□□□ -0.16
SHMT2-231ENST00000557433 IGHV3-15A0A0B4J1V0 119 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 KIR2DS1A0A191URI9 304 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 SSSCA1O60232 199 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 CBR3O75828 277 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 MYF5P13349 255 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 ITGA3P26006 1051 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 S100GP29377 79 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 KIR2DS4P43632 304 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 TAS2R30P59541 319 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 KIR2DS1Q14954 304 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF674Q2M3X9 581 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 ACSF3Q4G176 576 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-231ENST00000557433 OR2B11Q5JQS5 317 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 OR5D13Q8NGL4 314 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 CLDND2Q8NHS1 167 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 KCNE4Q8WWG9 221 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 CPNE4Q96A23 557 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-231ENST00000557433 SPSB4Q96A44 273 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 RNF150Q9ULK6 438 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 A0A0J9YW62 118 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 FAM221AA4D161 298 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF205O95201 554 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 GLI4P10075 376 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 ZNF32P17041 273 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 DYNLT3P51808 116 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 CMTM1Q8IZ96 169 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 M1APQ8TC57 530 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 Q8WTZ3 238 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 Q9N2K0 584 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 SH2D2AQ9NP31 389 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 SLC7A10Q9NS82 523 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 LIPGQ9Y5X9 500 aa14.03□□□□□ -0.16
SHMT2-231ENST00000557433 GON4LQ3T8J9 2241 aa14.02□□□□□ -0.16
SHMT2-231ENST00000557433 A0A1B0GV50 99 aa14.02□□□□□ -0.16
SHMT2-231ENST00000557433 CDRT15L2A8MXV6 281 aa14.02□□□□□ -0.16
SHMT2-231ENST00000557433 H0Y980 276 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms