RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 VEGFCP49767 419 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 LUMP51884 338 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ARHGDIBP52566 201 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 DLX6P56179 175 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 RAB25P57735 213 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF273Q14593 569 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 RCN1Q15293 331 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 C9orf152Q5JTZ5 239 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 SMARCD3Q6STE5 483 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZBTB49Q6ZSB9 765 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 KCTD8Q6ZWB6 473 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF329Q86UD4 541 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZDHHC21Q8IVQ6 265 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 TIGD4Q8IY51 512 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ZDHHC23Q8IYP9 409 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 KLHL30-AS1Q8NEE0 82 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 OR5M8Q8NGP6 311 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 NDNFQ8TB73 568 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 CHPT1Q8WUD6 406 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 PIGCQ92535 297 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ISOC1Q96CN7 298 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 LYZL4Q96KX0 146 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 RBM14Q96PK6 669 aaKnown RBP3.79□□□□□ -1.8
ATXN3-239ENST00000556315 ERMAPQ96PL5 475 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-239ENST00000556315 CDRT15Q96T59 188 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 EBF4Q9BQW3 602 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 OR51I2Q9H344 312 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 RGCCQ9H4X1 137 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 LYVE1Q9Y5Y7 322 aa3.79□□□□□ -1.8
ATXN3-239ENST00000556315 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
ATXN3-239ENST00000556315 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 hCG_38984A0A1B0GV85 526 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 A0A1W2PRQ8 180 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF732B4DXR9 585 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 TEX22C9J3V5 150 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 ZNF593O00488 134 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 DENRO43583 198 aaKnown RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 NPPAP01160 153 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 CD24P25063 80 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 HTR1DP28221 377 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 SLC6A6P31641 620 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 GPR12P47775 334 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 OMPP47874 163 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 OR3A4PP47883 348 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 CX3CR1P49238 355 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 INSL3P51460 131 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 FXYD6P3P58550 94 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 GRB2P62993 217 aaKnown RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 GNG3P63215 75 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 SLC35B1P78383 322 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 PRDX4Q13162 271 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 MED21Q13503 144 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 DGCR6Q14129 220 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 KIR2DS1Q14954 304 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 TWIST1Q15672 202 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 LRRC23Q53EV4 343 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 KLHL12Q53G59 568 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 FGD3Q5JSP0 725 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 TEX30Q5JUR7 227 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 C1orf146Q5VVC0 180 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 ACP7Q6ZNF0 438 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 PRSS45Q7RTY3 260 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 DCXRQ7Z4W1 244 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 CYP4Z1Q86W10 505 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 OR8J3Q8NGG0 315 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 OR2T4Q8NH00 348 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 OR8U1Q8NH10 309 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 SLAMF6Q96DU3 332 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 RNF125Q96EQ8 232 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 EDA2RQ9HAV5 297 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 S100A14Q9HCY8 104 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 KRCC1Q9NPI7 259 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-239ENST00000556315 C8orf4Q9NR00 106 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 DPM3Q9P2X0 92 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 CD300AQ9UGN4 299 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 RAB26Q9ULW5 256 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 COMMD3-BMI1R4GMX3 469 aa3.78□□□□□ -1.8
ATXN3-239ENST00000556315 IGHV2-26A0A0B4J1V2 119 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 IGLV5-39A0A0G2JS06 123 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 hADV38S2A0JD32 116 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 TVP23AA6NH52 213 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 SERPINE3A8MV23 424 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 LEUTXA8MZ59 168 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF878C9JN71 531 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 J3KRW8 73 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 K7N7A8 449 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 LDLRAD4O15165 306 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 NOS1APO75052 506 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 KRT36O76013 467 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 NDUFB8O95169 186 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 H1F0P07305 194 aaKnown RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 LYNP07948 512 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms