RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SOCS1O15524 211 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 RGS5O15539 181 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 PSPNO60542 156 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 HPGDSO60760 199 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CA11O75493 328 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 TPPPO94811 219 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 ECDO95905 644 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CSN2P05814 226 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CHATP28329 748 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CEBPDP49716 269 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 PAN3Q58A45 887 aaKnown RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CD276Q5ZPR3 534 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 OR8H2Q8N162 312 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 FAM216BQ8N7L0 139 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 WFDC11Q8NEX6 87 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 RAB3CQ96E17 227 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 DPCDQ9BVM2 203 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 SHARPINQ9H0F6 387 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 NCOR1P1Q9H4R4 102 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 NARFLQ9H6Q4 476 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-221ENST00000555773 CLN8Q9UBY8 286 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
SHMT2-221ENST00000555773 A0A096LNT2 108 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 FAM25AB3EWG3 89 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 FAM25CB3EWG5 89 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 FAM25GB3EWG6 89 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 XRCC3O43542 346 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 TFF1P04155 84 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 ELK1P19419 428 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 ERP29P30040 261 aaKnown RBP10.36□□□□□ -0.75
SHMT2-221ENST00000555773 S100A5P33763 92 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 TALDO1P37837 337 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 OR3A1P47881 315 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 PAX5Q02548 391 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 GRK1Q15835 563 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 ESCO2Q56NI9 601 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 WDR25Q64LD2 544 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-221ENST00000555773 LINC00299Q6ZSB3 139 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 BIVMQ86UB2 503 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 TMEM185AQ8NFB2 350 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 OR4S1Q8NGB4 309 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 C1orf159Q96HA4 380 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHMT2-221ENST00000555773 RABL2AQ9UBK7 228 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-221ENST00000555773 CTSZQ9UBR2 303 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 RABL2BQ9UNT1 228 aa10.36□□□□□ -0.75
SHMT2-221ENST00000555773 TANC2Q9HCD6 1990 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 POM121CA8CG34 1229 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 SERPINE3A8MV23 424 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 RNF223E7ERA6 249 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 H7C1Q1 480 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 FOXH1O75593 365 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 CLPXO76031 633 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 EIF4EP06730 217 aaKnown RBP10.35□□□□□ -0.75
SHMT2-221ENST00000555773 CDK2P24941 298 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 GNB2P62879 340 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 MOGAT2Q3SYC2 334 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 CDNFQ49AH0 187 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 PLAC9Q5JTB6 97 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 NKAPLQ5M9Q1 402 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 METAP1DQ6UB28 335 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-221ENST00000555773 GDPD3Q7L5L3 318 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 C6orf201Q7Z4U5 140 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 BPIFB2Q8N4F0 458 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 DMRTB1Q96MA1 342 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 WDFY2Q96P53 400 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 FAAP24Q9BTP7 215 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 SSBP3Q9BWW4 388 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-221ENST00000555773 PECRQ9BY49 303 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 PPA2Q9H2U2 334 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 MIXL1Q9H2W2 232 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 RIMS4Q9H426 269 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-221ENST00000555773 PTTG2Q9NZH5 202 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 ZNF581Q9P0T4 197 aa10.35□□□□□ -0.75
SHMT2-221ENST00000555773 POLR3KQ9Y2Y1 108 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-221ENST00000555773 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 MALRD1Q5VYJ5 2156 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 TRAV18A0A075B6X5 111 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 TRBV23-1A0A0A0MS06 115 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 A0A1B0GW55 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 A8MXK9 166 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 MELTFP08582 738 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 GSTP1P09211 210 aaKnown RBP10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L2P0CJ85 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L3P0CJ86 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L4P0CJ87 422 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L5P0CJ88 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L6P0CJ89 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 DUX4L7P0CJ90 424 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 SELLP14151 372 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 HIST1H1DP16402 221 aaKnown RBP10.34□□□□□ -0.75
SHMT2-221ENST00000555773 NDUFB7P17568 137 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 TNFSF8P32971 234 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 MNDAP41218 407 aa10.34□□□□□ -0.75
SHMT2-221ENST00000555773 MEF2CQ06413 473 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms