RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DUXBA0A1W2PPF3 345 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF727A8MUV8 499 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 C9J4A7 227 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CLDN34H7C241 214 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CYB5R3P00387 301 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 TRGC2P03986 189 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 TRGC1P0CF51 173 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 NHLH2Q02577 135 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 TRA2AQ13595 282 aaKnown RBP eCLIP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 TAF9Q16594 264 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CRIP3Q6Q6R5 217 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 FAM71F1Q96KD3 344 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 Q96M66 194 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 NEU1Q99519 415 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 NDUFAF3Q9BU61 184 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF700Q9H0M5 742 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 PNRC2Q9NPJ4 139 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 PLEKHJ1Q9NW61 149 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 FOXD3Q9UJU5 478 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 MCTS1Q9ULC4 181 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 HS3ST3B1Q9Y662 390 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CHCHD2Q9Y6H1 151 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 KNL1Q8NG31 2342 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 RP1P56715 2156 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 XRCC2O43543 280 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 DHRS3O75911 302 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 OPN1MWP04001 364 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 OPN1MW2P0DN77 364 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 OPN1MW3P0DN78 364 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 MTCP1P56278 107 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 OR8G1Q15617 311 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 HLA-BQ31612 363 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 C10orf128Q5T292 105 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CARD17Q5XLA6 110 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 FOXL2NBQ6ZUU3 175 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 LYZL2Q7Z4W2 148 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF283Q8N7M2 679 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 CLDND2Q8NHS1 167 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 PILRBQ9UKJ0 227 aa9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 ARID1BQ8NFD5 2236 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-210ENST00000555252 IGKV1D-8A0A087WSZ0 117 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 CCDC187A0A096LP49 1063 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 A8MWP6 167 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 H0YL77 283 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 STMND1H3BQB6 276 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 PHOX2AO14813 284 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 DIRAS3O95661 229 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 GCGP01275 180 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 TMEM225BP0DP42 221 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 FABP4P15090 132 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 MSR1P21757 451 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 IL2RGP31785 369 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 CDAP32320 146 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 DUSP3P51452 185 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 NOVA1P51513 510 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 DSCR4P56555 118 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 MFAP5Q13361 173 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 OR8B8Q15620 311 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 ACSF3Q4G176 576 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 PMS2CLQ68D20 193 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 UBALD2Q8IYN6 164 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 GJC3Q8NFK1 279 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 ABHD5Q8WTS1 349 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 TMEM54Q969K7 222 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 MOB3AQ96BX8 217 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 HIST1H2BLQ99880 126 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 CDH20Q9HBT6 801 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 SLC2A9Q9NRM0 540 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 LYRM2Q9NU23 88 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 OCIAD1Q9NX40 245 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 LIPGQ9Y5X9 500 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 ABCA7Q8IZY2 2146 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 IGHV1-45A0A0A0MS14 117 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 PIGBOS1A0A0B4J2F0 54 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 LOC102723971A0A1B0GUV8 181 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 A0A1B0GWJ7 208 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 ZNF814B7Z6K7 855 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 NDUFB7P17568 137 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 CLDN17P56750 224 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 CCL20P78556 96 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 OR52M1Q8NGK5 317 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 IFI44Q8TCB0 444 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 FRZBQ92765 325 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 POM121Q96HA1 1249 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 PGAM5Q96HS1 289 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 IMMP1LQ96LU5 166 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 P2RX4Q99571 388 aa9.27□□□□□ -0.93
MTHFD1-210ENST00000555252 UNC13CQ8NB66 2214 aa9.26□□□□□ -0.93
MTHFD1-210ENST00000555252 RALGAPA1Q6GYQ0 2036 aa9.26□□□□□ -0.93
MTHFD1-210ENST00000555252 A0A1B0GU03 582 aa9.26□□□□□ -0.93
MTHFD1-210ENST00000555252 CLEC18AA5D8T8 446 aa9.26□□□□□ -0.93
MTHFD1-210ENST00000555252 ZNF850A8MQ14 1090 aa9.26□□□□□ -0.93
MTHFD1-210ENST00000555252 RER1O15258 196 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms