RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 DCAF16Q9NXF7 216 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 TAS2R8Q9NYW2 309 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 ZNF222Q9UK12 451 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
SHOX2-206ENST00000554685 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.48
SHOX2-206ENST00000554685 TANC2Q9HCD6 1990 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 FUOMA2VDF0 154 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.49
SHOX2-206ENST00000554685 UPK1BO75841 260 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 CSN2P05814 226 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 DTYMKP23919 212 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 RCVRNP35243 200 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 PDLIM4P50479 330 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 AP3S2P59780 193 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 IL13RA1P78552 427 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 DGCR2P98153 550 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM155Q4W5P6 130 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF788Q6ZQV5 615 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 DCDC5Q6ZRR9 648 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 TRAPPC6BQ86SZ2 158 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 CD177Q8N6Q3 437 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 C19orf18Q8NEA5 215 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 OR5T2Q8NGG2 359 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 OR52I2Q8NH67 350 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 SDHCQ99643 169 aaPredicted RBP12.02□□□□□ -0.49
SHOX2-206ENST00000554685 THAP7Q9BT49 309 aaPredicted RBP12.02□□□□□ -0.49
SHOX2-206ENST00000554685 FAM234AQ9H0X4 552 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 CHMP1AQ9HD42 196 aaPredicted RBP12.02□□□□□ -0.49
SHOX2-206ENST00000554685 ETAA1Q9NY74 926 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 MTFP1Q9UDX5 166 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF107Q9UII5 783 aaPredicted RBP12.02□□□□□ -0.49
SHOX2-206ENST00000554685 AK3Q9UIJ7 227 aa12.02□□□□□ -0.49
SHOX2-206ENST00000554685 DYSFO75923 2080 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 TENM4Q6N022 2769 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 UBE2QL1A1L167 161 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ISPDA4D126 451 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 LYNX1G3V0Z9 82 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 HSPB6O14558 160 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 MGST3O14880 152 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 SIGLEC5O15389 551 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF205O95201 554 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ECDO95905 644 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 IGHV2-70P01814 119 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 IGHV4-39P01824 125 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 GYPAP02724 150 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 LYNX1P0DP58 116 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 PTHLHP12272 177 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 IL7P13232 177 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 DNASE1P24855 282 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 GPR6P46095 362 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 CEBPDP49716 269 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ATP5J2P56134 94 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ZMYND11Q15326 602 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 CARTPTQ16568 116 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 MOB1BQ7L9L4 216 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ZFAND2BQ8WV99 257 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 NUDCD2Q8WVJ2 157 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 DEDD2Q8WXF8 326 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 GCDHQ92947 438 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 OCSTAMPQ9BR26 566 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 GSX2Q9BZM3 304 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 PPA2Q9H2U2 334 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM165Q9HC07 324 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ABCB10Q9NRK6 738 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 BEX4Q9NWD9 120 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF581Q9P0T4 197 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 KAAG1Q9UBP8 84 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 RBMX2Q9Y388 322 aaKnown RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
SHOX2-206ENST00000554685 CACNA1DQ01668 2161 aa12.01□□□□□ -0.49
SHOX2-206ENST00000554685 DSCAMO60469 2012 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM30CPA0ZSE6 113 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 K7N7A8 449 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 NDUFS8O00217 210 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 ZNF737O75373 536 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 LY6HO94772 140 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 CSF1P09603 554 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 GDNFP39905 211 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 OR3A1P47881 315 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 DSCR9P59020 149 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 DEFA1P59665 94 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 DEFA3P59666 94 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
SHOX2-206ENST00000554685 PAX5Q02548 391 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 GUCA2AQ02747 115 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 GRK1Q15835 563 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 BAK1Q16611 211 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 RNASE12Q5GAN4 147 aaKnown RBP12□□□□□ -0.49
SHOX2-206ENST00000554685 OLFML2AQ68BL7 652 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 BRICD5Q6PL45 260 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 TOMM5Q8N4H5 51 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 TRIM63Q969Q1 353 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 GAFA1Q96PS6 74 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 CCL13Q99616 98 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 TMEM246Q9BRR3 403 aa12□□□□□ -0.49
SHOX2-206ENST00000554685 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
SHOX2-206ENST00000554685 HRNRQ86YZ3 2850 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms