RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FAUP35544 74 aaKnown RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 TAS2R20P59543 309 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 GNG2P59768 71 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ERVK11-1P61568 191 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ARFRP1Q13795 201 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 NDUFA5Q16718 116 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MST1LQ2TV78 715 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 HFEQ30201 348 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 SMIM21Q3B7S5 101 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF260Q3ZCT1 412 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 C1QL2Q7Z5L3 287 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 DTX2Q86UW9 622 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 CALHM1Q8IU99 346 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 C11orf53Q8IXP5 236 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 TOMM5Q8N4H5 51 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ACBD4Q8NC06 268 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 OR4M1Q8NGD0 313 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 OR10AD1Q8NGE0 317 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 OR5D13Q8NGL4 314 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 OR10K1Q8NGX5 313 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 LILRB1Q8NHL6 650 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ITLN1Q8WWA0 313 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 GAL3ST1Q99999 423 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 C7orf50Q9BRJ6 194 aaKnown RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 THAP7Q9BT49 309 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 LPAR5Q9H1C0 372 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 BANF2Q9H503 90 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 SAP30LQ9HAJ7 183 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 UFSP2Q9NUQ7 469 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MTCH1Q9NZJ7 389 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MYEF2Q9P2K5 600 aaKnown RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 DNAJB11Q9UBS4 358 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 ZNF107Q9UII5 783 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 MGAT4AQ9UM21 535 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 NPTNQ9Y639 398 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 NBASA2RRP1 2371 aa4.22□□□□□ -1.73
VTI1B-202ENST00000553619 CHD3Q12873 2000 aaKnown RBP4.22□□□□□ -1.73
VTI1B-202ENST00000553619 SPTBN1Q01082 2364 aaKnown RBP4.21□□□□□ -1.73
VTI1B-202ENST00000553619 DSCAMO60469 2012 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PPIAL4EA0A075B759 164 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 TRAV38-1A0A0B4J264 116 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 IGKV1-12A0A0C4DH73 117 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 A0A0G2JMP0 313 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 A0A0X1KG70 313 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 NAP1L6A6NFF2 107 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ZSCAN5BA6NJL1 495 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SRRM5B3KS81 715 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PPIAL4DF5H284 164 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 C19orf84I3L1E1 186 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SOCS1O15524 211 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SYNGR1O43759 233 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PFDN1O60925 122 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PDCD6O75340 191 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 RHBDL1O75783 438 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 UPK1BO75841 260 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 OR7C1O76099 320 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 FSTL3O95633 263 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 LHBP01229 141 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 IGKV1D-12P01611 117 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 HLA-DQB1P01920 261 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SFTPBP07988 381 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 CSF1P09603 554 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 DANCRP0C864 163 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PPIAL4FP0DN26 164 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF44P15621 663 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MUC1P15941 1255 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 HIST1H1DP16402 221 aaKnown RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 GABRR1P24046 479 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 LMO1P25800 156 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 RCVRNP35243 200 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MDH2P40926 338 aaKnown RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 NPBWR2P48146 333 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 KCNJ3P48549 501 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 EFNB2P52799 333 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 RBM11P57052 281 aaKnown RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ACTBP60709 375 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ACTG1P63261 375 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 CCL8P80075 99 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MRPS11P82912 194 aaKnown RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 CBX3Q13185 183 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 UNC119Q13432 240 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF146Q15072 292 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 TAF9Q16594 264 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MICBQ29980 383 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ATAD3CQ5T2N8 411 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 PRAMEF6Q5VXH4 476 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF57Q68EA5 555 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-202ENST00000553619 OR10K2Q6IF99 312 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MZT2BQ6NZ67 158 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 WDR82Q6UXN9 313 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ACP7Q6ZNF0 438 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MOGAT3Q86VF5 341 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SNX29P2Q8IUI4 249 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 MINDY2Q8NBR6 621 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 TMEM104Q8NE00 496 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 OR4M2Q8NGB6 313 aa4.21□□□□□ -1.74
VTI1B-202ENST00000553619 SETD6Q8TBK2 473 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms