RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NME4O00746 187 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 AGPAT2O15120 278 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 ORC5O43913 435 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 TPST1O60507 370 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 UGT2B11O75310 529 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 CA11O75493 328 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 BANF1O75531 89 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 FOXH1O75593 365 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OR7C1O76099 320 aaPredicted RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 SUPT7LO94864 414 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 KLF8O95600 359 aaPredicted RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 SLC25A27O95847 323 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 C1QCP02747 245 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 HPNP05981 417 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OR5AL1P0C617 328 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 RBMY1DP0C7P1 496 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 RBMY1A1P0DJD3 496 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 FOLR1P15328 257 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 GABRG2P18507 467 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 NELFEP18615 380 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 ARL2P36404 184 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 EIF2B2P49770 351 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 DIO3P55073 304 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 TPI1P60174 286 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 HPCAP84074 193 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 PSG4Q00888 419 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 GINS1Q14691 196 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 RSU1Q15404 277 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 NSDHLQ15738 373 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 SNRNP35Q16560 246 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 TNFAIP8L3Q5GJ75 292 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 CLEC12AQ5QGZ9 265 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 CASC10Q5T4H9 136 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OTPQ5XKR4 325 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 TNFAIP8L2Q6P589 184 aaPredicted RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 EPGNQ6UW88 154 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 FAM231DQ6ZW35 169 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 ZNF571Q7Z3V5 609 aaPredicted RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 SPICQ8N5J4 248 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 ZNF283Q8N7M2 679 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 ZNF485Q8NCK3 441 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OR4P4Q8NGL7 312 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OR2G2Q8NGZ5 317 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OR5J2Q8NH18 312 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 OR4X1Q8NH49 305 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 SPATA3Q8NHX4 192 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 DDIT4LQ96D03 193 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 RCN3Q96D15 328 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 ZMYND19Q96E35 227 aaPredicted RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 PYURFQ96I23 114 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 GABRG3Q99928 467 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 RASL11BQ9BPW5 248 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 GINS3Q9BRX5 216 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 DCSTAMPQ9H295 470 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 PRORYQ9H606 182 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 REEP1Q9H902 201 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 LRTM1Q9HBL6 345 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 SH2D2AQ9NP31 389 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 CALYQ9NYX4 217 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 COPZ2Q9P299 210 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 CLCF1Q9UBD9 225 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 GNPTGQ9UJJ9 305 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 JPT1Q9UK76 154 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 ING4Q9UNL4 249 aa2.81□□□□□ -1.96
TDP1-207ENST00000553617 YLPM1P49750 1951 aaKnown RBP2.81□□□□□ -1.96
TDP1-207ENST00000553617 WDR97A6NE52 1622 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 BICRAQ9NZM4 1560 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 SMG6Q86US8 1419 aaKnown RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 KLF18A0A0U1RQI7 1052 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 EXOC1LA0A1B0GW35 172 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ARL5CA6NH57 179 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 TRIM49D1C9J1S8 452 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 KRTAP4-16G5E9R7 235 aaPredicted RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 TRAPPC2LH3BP13 241 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 K7EMT4 169 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 M0R1B8 84 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 TNFRSF11BO00300 401 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 FKBP6O75344 327 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 SOX14O95416 240 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 OR56A5P0C7T3 313 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 METTL15P1P0C7V9 234 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ZNF806P0C7X5 589 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ESDP10768 282 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 GABRA1P14867 456 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 ZNF250P15622 560 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 GPX2P18283 190 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 MYL12AP19105 171 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 RAB5AP20339 215 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 SLC2A5P22732 501 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 CD200P41217 278 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 VDAC2P45880 294 aaPredicted RBP2.8□□□□□ -1.96
TDP1-207ENST00000553617 GALR1P47211 349 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 LGALS7P47929 136 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 CDKN2DP55273 166 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 OR12D2P58182 307 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 PPP1CBP62140 327 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 TBPL1P62380 186 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 RHOBP62745 196 aa2.8□□□□□ -1.96
TDP1-207ENST00000553617 HIST1H3AP68431 136 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms