RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MEGF9Q9H1U4 602 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 TNFRSF19Q9NS68 423 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 ING4Q9UNL4 249 aa12.52□□□□□ -0.41
SHMT2-204ENST00000553324 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 IGHV1-8P0DP01 117 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 FSTP19883 344 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 OR3A1P47881 315 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 DLX6P56179 175 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 SLC35A2P78381 396 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 PRB3Q04118 309 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-204ENST00000553324 DOC2BQ14184 412 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 AANATQ16613 207 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 Q6P435 159 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 IZUMO2Q6UXV1 221 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 TRAPPC6BQ86SZ2 158 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 OR13C5Q8NGS8 318 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 CORO2AQ92828 525 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 NR1H4Q96RI1 486 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-204ENST00000553324 BARHL1Q9BZE3 327 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 DUSP21Q9H596 190 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
SHMT2-204ENST00000553324 MEGF11A6BM72 1044 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 SLC33A1O00400 549 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-204ENST00000553324 HTR3BO95264 441 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 IGHV4-59P01825 116 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 CFPP27918 469 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 KCNJ3P48549 501 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 NHLRC3Q5JS37 347 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 OR52W1Q6IF63 320 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 LINC00596Q86U02 117 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 OSR2Q8N2R0 312 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 PNKDQ8N490 385 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 ZNF565Q8N9K5 539 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 OR11H6Q8NGC7 330 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 OR4F5Q8NH21 305 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 OR14A2Q96R54 314 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 ZNF184Q99676 751 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-204ENST00000553324 NCOR1P1Q9H4R4 102 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 RAB26Q9ULW5 256 aa12.5□□□□□ -0.41
SHMT2-204ENST00000553324 TBL2Q9Y4P3 447 aaKnown RBP12.5□□□□□ -0.41
SHMT2-204ENST00000553324 RGS10O43665 173 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 GTF2F2P13984 249 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 COX7A1P24310 79 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 OR3A4PP47883 348 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 AESQ08117 197 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 MED22Q15528 200 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 RBM48Q5RL73 367 aaKnown RBP12.49□□□□□ -0.41
SHMT2-204ENST00000553324 ZNF782Q6ZMW2 699 aaPredicted RBP12.49□□□□□ -0.41
SHMT2-204ENST00000553324 TPRX1Q8N7U7 411 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 NKAIN3Q8N8D7 197 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 MALSU1Q96EH3 234 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 MRPS24Q96EL2 167 aaKnown RBP12.49□□□□□ -0.41
SHMT2-204ENST00000553324 DERL3Q96Q80 235 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 ZNF747Q9BV97 191 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 PPA2Q9H2U2 334 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 IFT22Q9H7X7 185 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 BEX1Q9HBH7 125 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 ISYNA1Q9NPH2 558 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 ST3GAL6Q9Y274 331 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 MMP24Q9Y5R2 645 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 SESN1Q9Y6P5 492 aa12.49□□□□□ -0.41
SHMT2-204ENST00000553324 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 A0A1W2PPK0 400 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 ODAMA1E959 279 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 FAM90A8PA6NJQ4 464 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 CDRT1O95170 752 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 NDUFA7O95182 113 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 ARG1P05089 322 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 CRHBPP24387 322 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 VHLP40337 213 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 IRF3Q14653 427 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
SHMT2-204ENST00000553324 UNQ9370/PRO34162Q6UXP9 181 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 PRSS48Q7RTY5 328 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 JAGN1Q8N5M9 183 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 UFD1Q92890 307 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-204ENST00000553324 SSX3Q99909 188 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 UQCC2Q9BRT2 126 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 VPREB3Q9UKI3 123 aa12.48□□□□□ -0.41
SHMT2-204ENST00000553324 LSM2Q9Y333 95 aaKnown RBP12.48□□□□□ -0.41
SHMT2-204ENST00000553324 H3BUI4 141 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 GPR137BO60478 399 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 CLPXO76031 633 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 MAS1P04201 325 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 GLIPR1P48060 266 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 PAX5Q02548 391 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 DYNC1I2Q13409 638 aaKnown RBP12.47□□□□□ -0.41
SHMT2-204ENST00000553324 TRAM1Q15629 374 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 TAF9Q16594 264 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms