RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 AADACL4Q5VUY2 407 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 LPCAT4Q643R3 524 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 KCTD18Q6PI47 426 aaPredicted RBP5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 C11orf88Q6PI97 169 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 AMIGO2Q86SJ2 522 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 CATSPERDQ86XM0 798 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 OR10H4Q8NGA5 316 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 OR56B4Q8NH76 319 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 RFESDQ8TAC1 157 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 FGGYQ96C11 551 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 COQ2Q96H96 371 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 SNX22Q96L94 193 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 NR1H4Q96RI1 486 aaPredicted RBP5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 IFT22Q9H7X7 185 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF556Q9HAH1 456 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 SLC25A19Q9HC21 320 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 TBL2Q9Y4P3 447 aaKnown RBP5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 PCDHGB5Q9Y5G0 923 aa5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 TSSC4Q9Y5U2 329 aaPredicted RBP5.41□□□□□ -1.54
PRPF40B-214ENST00000551320 hCG_2014768A0A024R1R8 64 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 LOC107986453A0A1B0GWG9 222 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 hADV38S2A0JD32 116 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 ARRDC5A6NEK1 342 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF670-ZNF695F2Z2N8 137 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 OR2H2O95918 312 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 CPEP16870 476 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 P2RX3P56373 397 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 NANOS3P60323 173 aaKnown RBP5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 SLC35A2P78381 396 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 ZNF85Q03923 595 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 HES1Q14469 280 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 C17orf58Q2M2W7 97 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 TPTE2P1Q5T6R2 138 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 LHFPL2Q6ZUX7 228 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 KRT74Q7RTS7 529 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 FAM58AQ8N1B3 248 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 DRAM1Q8N682 238 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 OR10K1Q8NGX5 313 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 PLEKHA1Q9HB21 404 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 MED4Q9NPJ6 270 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 DPM3Q9P2X0 92 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 GNG8Q9UK08 70 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 PITPNC1Q9UKF7 332 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 SLC7A11Q9UPY5 501 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 POLDIP2Q9Y2S7 368 aa5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 UBE2J1Q9Y385 318 aaPredicted RBP5.4□□□□□ -1.54
PRPF40B-214ENST00000551320 PSMB11A5LHX3 300 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ACOD1A6NK06 481 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ZNF736B4DX44 427 aaPredicted RBP5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 LY6LH3BQJ8 138 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 BUB1B-PAK6H3BSN5 160 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ZNF254O75437 659 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 DCTN3O75935 186 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ATP6V1B1P15313 513 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ZNF44P15621 663 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 PEX2P28328 305 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 GLP1RP43220 463 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 THBS3P49746 956 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 FUT6P51993 359 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 MTCP1P56278 107 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 EFNB1P98172 346 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 KPNB1Q14974 876 aaKnown RBP5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ZSCAN26Q16670 478 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 MINOS1Q5TGZ0 78 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 LCN1P1Q5VSP4 162 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 Q6P435 159 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 FAHD1Q6P587 224 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 DEGS2Q6QHC5 323 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 OR2W3Q7Z3T1 314 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 KLHL30-AS1Q8NEE0 82 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 OR4X2Q8NGF9 303 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 OR13A1Q8NGR1 328 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 OR13C9Q8NGT0 318 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 PLPPR1Q8TBJ4 325 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 TMEM163Q8TC26 289 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ASB17Q8WXJ9 295 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ORAI1Q96D31 301 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 ASB9Q96DX5 294 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 BORCS8Q96FH0 119 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 RAX2Q96IS3 184 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 RBM14Q96PK6 669 aaKnown RBP5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 OR5B12Q96R08 314 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 PKIBQ9C010 78 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 NEK6Q9HC98 313 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 CLN6Q9NWW5 311 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 DNAJB9Q9UBS3 223 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 KIF25Q9UIL4 384 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 HHLA2Q9UM44 414 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 SNX5Q9Y5X3 404 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 LINC00312Q9Y6C7 94 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 LYSTQ99698 3801 aa5.39□□□□□ -1.55
PRPF40B-214ENST00000551320 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
PRPF40B-214ENST00000551320 IGHV3-43A0A0B4J1X8 118 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms