RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 RTBDNQ9BSG5 229 aaPredicted RBP16.66■□□□□ 0.26
SSH1-209ENST00000551165 SPEF1Q9Y4P9 236 aa16.66■□□□□ 0.26
SSH1-209ENST00000551165 NPTNQ9Y639 398 aa16.66■□□□□ 0.26
SSH1-209ENST00000551165 ROS1P08922 2347 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 MCRIP1C9JLW8 97 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 DEGS1O15121 323 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 NAPSAO96009 420 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 GLRA1P23415 457 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 PMELP40967 661 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 IL13RA2Q14627 380 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 C1orf174Q8IYL3 243 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 KDF1Q8NAX2 398 aaPredicted RBP16.65■□□□□ 0.26
SSH1-209ENST00000551165 DPCDQ9BVM2 203 aaPredicted RBP16.65■□□□□ 0.26
SSH1-209ENST00000551165 ABCD4O14678 606 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 OR2H2O95918 312 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 KLF3P57682 345 aaPredicted RBP16.65■□□□□ 0.26
SSH1-209ENST00000551165 BSPH1Q075Z2 132 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 IGSF11Q5DX21 431 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 SPICQ8N5J4 248 aa16.65■□□□□ 0.26
SSH1-209ENST00000551165 CEACAM18A8MTB9 384 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 GOSR2O14653 212 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 PEG10Q86TG7 708 aaKnown RBP16.64■□□□□ 0.25
SSH1-209ENST00000551165 TMEM17Q86X19 198 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 POC1AQ8NBT0 407 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 TLNRD1Q9H1K6 362 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 PRR13Q9NZ81 148 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 IGLV3-9A0A075B6K5 115 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 TRAV39A0A0B4J263 110 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 C9orf170A2RU37 121 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 PRSS44E7EML9 344 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 H3BUI4 141 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 SPRY3O43610 288 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 VAMP1P23763 118 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 GRNP28799 593 aaKnown RBP16.64■□□□□ 0.25
SSH1-209ENST00000551165 CASP6P55212 293 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 GRK1Q15835 563 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 TMEM108Q6UXF1 575 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 C12orf45Q8N5I9 185 aaPredicted RBP16.64■□□□□ 0.25
SSH1-209ENST00000551165 CASTOR1Q8WTX7 329 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 ZNF286AQ9HBT8 521 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 HES4Q9HCC6 221 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 Q9N2K0 584 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 OR14J1Q9UGF5 321 aa16.64■□□□□ 0.25
SSH1-209ENST00000551165 FAM172BPA6NC97 362 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 NKX2-6A6NCS4 301 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 FAM90A27PA6NNH2 459 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 SLC33A1O00400 549 aaPredicted RBP16.63■□□□□ 0.25
SSH1-209ENST00000551165 SCTP09683 121 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 LINC00596Q86U02 117 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 MRPL30Q8TCC3 161 aaKnown RBP16.63■□□□□ 0.25
SSH1-209ENST00000551165 NECAP2Q9NVZ3 263 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 C1orf123Q9NWV4 160 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 TAAR3PQ9P1P4 343 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 SLC23A1Q9UHI7 598 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 hCG_1807616A0A1W2PRN6 198 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 FPR2P25090 351 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 IFITM2Q01629 132 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 LAMTOR1Q6IAA8 161 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 LYG2Q86SG7 212 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 Q8IYB0 196 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 OR2T35Q8NGX2 323 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 GRPEL2Q8TAA5 225 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 ELMOD3Q96FG2 381 aa16.63■□□□□ 0.25
SSH1-209ENST00000551165 NOS1APO75052 506 aaPredicted RBP16.62■□□□□ 0.25
SSH1-209ENST00000551165 RCC1P18754 421 aaPredicted RBP16.62■□□□□ 0.25
SSH1-209ENST00000551165 NFYAP23511 347 aaPredicted RBP16.62■□□□□ 0.25
SSH1-209ENST00000551165 IL13RA1P78552 427 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 ZNF146Q15072 292 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 PLPPR1Q8TBJ4 325 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 SUPT4H1P63272 117 aaKnown RBP16.62■□□□□ 0.25
SSH1-209ENST00000551165 ADORA2A-AS1P86434 159 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 LY6G6FQ5SQ64 297 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 ADAM5Q6NVV9 412 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 DHRS11Q6UWP2 260 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 OR2V2Q96R30 315 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 IFT22Q9H7X7 185 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 SPACA1Q9HBV2 294 aa16.62■□□□□ 0.25
SSH1-209ENST00000551165 CCSO14618 274 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 SLC22A5O76082 557 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 PTBP3O95758 552 aaKnown RBP16.61■□□□□ 0.25
SSH1-209ENST00000551165 EGR1P18146 543 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 PTAFRP25105 342 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 FCGR2CP31995 323 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 SNRPD2P62316 118 aaKnown RBP16.61■□□□□ 0.25
SSH1-209ENST00000551165 HERPUD1Q15011 391 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 PAN3Q58A45 887 aaKnown RBP16.61■□□□□ 0.25
SSH1-209ENST00000551165 SPERTQ8NA61 448 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 ZBTB8BQ8NAP8 495 aaPredicted RBP16.61■□□□□ 0.25
SSH1-209ENST00000551165 OR5T2Q8NGG2 359 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 USB1Q9BQ65 265 aaKnown RBP16.61■□□□□ 0.25
SSH1-209ENST00000551165 RHOFQ9HBH0 211 aa16.61■□□□□ 0.25
SSH1-209ENST00000551165 PSPNO60542 156 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 OR2A4O95047 310 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 KNG1P01042 644 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 PGAM2P15259 253 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 CD34P28906 385 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 ERP29P30040 261 aaKnown RBP16.6■□□□□ 0.25
SSH1-209ENST00000551165 FXYD4P59646 89 aa16.6■□□□□ 0.25
SSH1-209ENST00000551165 ATXN7L3Q14CW9 347 aaPredicted RBP16.6■□□□□ 0.25
SSH1-209ENST00000551165 ACP7Q6ZNF0 438 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms