RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KRBOX4Q5JUW0 171 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 Q6P435 159 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 C1QL4Q86Z23 238 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 ABHD12Q8N2K0 398 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 DTX3Q8N9I9 347 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 OR4P4Q8NGL7 312 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 COQ2Q96H96 371 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 RHOFQ9HBH0 211 aa13.15□□□□□ -0.3
VPS29-207ENST00000549970 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.3
VPS29-207ENST00000549970 ODAMA1E959 279 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 SLC33A1O00400 549 aaPredicted RBP13.14□□□□□ -0.31
VPS29-207ENST00000549970 HSPB6O14558 160 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 DEGS1O15121 323 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 WBP4O75554 376 aaKnown RBP13.14□□□□□ -0.31
VPS29-207ENST00000549970 RAB3AP20336 220 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 HTR1DP28221 377 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 GDNFP39905 211 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 DYNLT3P51808 116 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 CDK5R1Q15078 307 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 OR52W1Q6IF63 320 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 HEPN1Q6WQI6 88 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 SATL1Q86VE3 508 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 CHST4Q8NCG5 386 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 OR51A2Q8NGJ7 313 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 HAVCR2Q8TDQ0 301 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 CFHR4Q92496 578 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 RGP1Q92546 391 aaPredicted RBP13.14□□□□□ -0.31
VPS29-207ENST00000549970 CORO2AQ92828 525 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 NR1H4Q96RI1 486 aaPredicted RBP13.14□□□□□ -0.31
VPS29-207ENST00000549970 GPER1Q99527 375 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 FGF20Q9NP95 211 aaPredicted RBP13.14□□□□□ -0.31
VPS29-207ENST00000549970 SERTAD4Q9NUC0 356 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 TAS2R4Q9NYW5 299 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 TAS2R3Q9NYW6 316 aa13.14□□□□□ -0.31
VPS29-207ENST00000549970 H0YJX3 145 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 MAGEB3O15480 346 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 CLIC3O95833 236 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 CSN2P05814 226 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 PTGFRP43088 359 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 MTNR1BP49286 362 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 ETV1P50549 477 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 ARSJQ5FYB0 599 aaPredicted RBP13.13□□□□□ -0.31
VPS29-207ENST00000549970 OR2G6Q5TZ20 316 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 LYG1Q8N1E2 194 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 Q8N2B8 174 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 CNIH3Q8TBE1 160 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 ZNF596Q8TC21 504 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 TNFAIP8L1Q8WVP5 186 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 STMN2Q93045 179 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
VPS29-207ENST00000549970 RDH12Q96NR8 316 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 OR5M11Q96RB7 305 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 JAM3Q9BX67 310 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 PRSS22Q9GZN4 317 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
VPS29-207ENST00000549970 PPIL3Q9H2H8 161 aaKnown RBP13.13□□□□□ -0.31
VPS29-207ENST00000549970 GABRPO00591 440 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 PEX14O75381 377 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 FBXO24O75426 580 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 BLCAPP62952 87 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 LRRC36Q1X8D7 754 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 RPL22L1Q6P5R6 122 aaKnown RBP13.12□□□□□ -0.31
VPS29-207ENST00000549970 Q6ZS46 218 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 RTN4RL2Q86UN3 420 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 PXT1Q8NFP0 134 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 OR4D6Q8NGJ1 314 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 OR10K1Q8NGX5 313 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 GPR148Q8TDV2 347 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 ZNF286AQ9HBT8 521 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 DPM3Q9P2X0 92 aa13.12□□□□□ -0.31
VPS29-207ENST00000549970 FAM90A22PA8MWA6 464 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 CD2P06729 351 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 CD28P10747 220 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 CD24P25063 80 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 DCKP27707 260 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 GLP1RP43220 463 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 BDH1Q02338 343 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 RSU1Q15404 277 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 C17orf58Q2M2W7 97 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 NSUN5P1Q3KNT7 163 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 TMEM95Q3KNT9 176 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 CCDC58Q4VC31 144 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 PAN3Q58A45 887 aaKnown RBP13.11□□□□□ -0.31
VPS29-207ENST00000549970 ELP2Q6IA86 826 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 ZNF529Q6P280 563 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 TMPRSS11AQ6ZMR5 421 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 CYGBQ8WWM9 190 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 TMEM106AQ96A25 262 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 OR6C3Q9NZP0 311 aa13.11□□□□□ -0.31
VPS29-207ENST00000549970 TRAV24A0A0B4J272 114 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 ZNF729A6NN14 1252 aaPredicted RBP13.1□□□□□ -0.31
VPS29-207ENST00000549970 LEUTXA8MZ59 168 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 TOR1AO14656 332 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 HTR3BO95264 441 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 IGLV1-47P01700 117 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 MYL12AP19105 171 aa13.1□□□□□ -0.31
VPS29-207ENST00000549970 NFYBP25208 207 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms