RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 SELENOKQ9Y6D0 94 aa3.08□□□□□ -1.92
APAF1-208ENST00000549007 USF3Q68DE3 2245 aa3.08□□□□□ -1.92
APAF1-208ENST00000549007 LRBAP50851 2863 aa3.08□□□□□ -1.92
APAF1-208ENST00000549007 OR6C65A6NJZ3 312 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 DEFB108AA8MXU0 73 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF593O00488 134 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 ABCD4O14678 606 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 WBP4O75554 376 aaKnown RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 FARS2O95363 451 aaKnown RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 RAB36O95755 333 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ANXA3P12429 323 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF823P16415 610 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 CRABP1P29762 137 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 CALCRP30988 508 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 VHLP40337 213 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 GUCA1AP43080 201 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 PRKXP51817 358 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 HERV-K104P61576 105 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 PSG4Q00888 419 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 GLO1Q04760 184 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 MFGE8Q08431 387 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 EIF2B1Q14232 305 aaKnown RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 GSG1Q2KHT4 349 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 LCE3BQ5TA77 95 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 AADACL4Q5VUY2 407 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 LAIR2Q6ISS4 152 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 DNM1P34Q6PK57 102 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 SSX6Q7RTT6 188 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 DCXRQ7Z4W1 244 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 SMIM29Q86T20 159 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 NAA40Q86UY6 237 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 OR56B2PQ8NGI1 322 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 TEAD3Q99594 435 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 OR2H1Q9GZK4 316 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 RACGAP1Q9H0H5 632 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 VCXQ9H320 206 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 SIAEQ9HAT2 523 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 CCNB1IP1Q9NPC3 277 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ITPR2Q14571 2701 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 NAV2Q8IVL1 2488 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 C5orf49A4QMS7 147 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 SMIM1B2RUZ4 78 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 E9PQ18 207 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 CHEK1O14757 476 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 MMP7P09237 267 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 SLC25A1P53007 311 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 MAD2L1BPQ15013 274 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF718Q3SXZ3 478 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 TIMM23BQ5SRD1 257 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 FAM27BQ5VT28 67 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF691Q5VV52 312 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 FAM53AQ6NSI3 398 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 LRRN1Q6UXK5 716 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 PACRGLQ8N7B6 248 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 BPIFB6Q8NFQ5 453 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 OR10H4Q8NGA5 316 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 THEM6Q8WUY1 208 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 HEATR1Q9H583 2144 aaKnown RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 B3GNT2Q9NY97 397 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ENOPH1Q9UHY7 261 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 FBXL3Q9UKT7 428 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ELF5Q9UKW6 265 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 ASH1LQ9NR48 2969 aaKnown RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 BTBD17A6NE02 478 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 F5H5K5 113 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 SGCEO43556 437 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF133P52736 654 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 SH3BGRP55822 239 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 TLE4Q04727 773 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ALKBH6Q3KRA9 238 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 SLC36A2Q495M3 483 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 DMKNQ6E0U4 476 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF562Q6V9R5 426 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 C1QL2Q7Z5L3 287 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 ZNF101Q8IZC7 436 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 C8orf59Q8N0T1 100 aaPredicted RBP3.07□□□□□ -1.92
APAF1-208ENST00000549007 RHOXF1Q8NHV9 184 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 APOL4Q9BPW4 351 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 PRRG3Q9BZD7 231 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 HIPK2Q9H2X6 1198 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 UBAP1Q9NZ09 502 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 PPP1R3CQ9UQK1 317 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 CSMD2Q7Z408 3487 aa3.07□□□□□ -1.92
APAF1-208ENST00000549007 IGHV2OR16-5A0A0B4J2B6 119 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 CYSRT1A8MQ03 144 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 C12orf71A8MTZ7 269 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 CENPBD1B2RD01 187 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 RPP14O95059 124 aaKnown RBP3.06□□□□□ -1.92
APAF1-208ENST00000549007 CST2P09228 141 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 NR2C1P13056 603 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 ZNF14P17017 642 aaPredicted RBP3.06□□□□□ -1.92
APAF1-208ENST00000549007 NPR2P20594 1047 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 CRYGSP22914 178 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 LOXP28300 417 aaPredicted RBP3.06□□□□□ -1.92
APAF1-208ENST00000549007 CXCR4P61073 352 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 DHODHQ02127 395 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 FGL1Q08830 312 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 SRSF9Q13242 221 aaKnown RBP eCLIP3.06□□□□□ -1.92
APAF1-208ENST00000549007 TP53I3Q53FA7 332 aa3.06□□□□□ -1.92
APAF1-208ENST00000549007 DMRTC1Q5HYR2 192 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms