RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GAMTQ14353 236 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 TMEM252Q8N6L7 170 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 OR8G5Q8NG78 346 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 SNIP1Q8TAD8 396 aaKnown RBP11.88□□□□□ -0.51
HDAC7-228ENST00000548938 DNASE2BQ8WZ79 361 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 TVP23CQ96ET8 276 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF385AQ96PM9 386 aaKnown RBP11.88□□□□□ -0.51
HDAC7-228ENST00000548938 NIPSNAP3BQ9BS92 247 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 IGLV3-32A0A0A0MS00 114 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 BTBD17A6NE02 478 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 PLXDC1Q8IUK5 500 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 ARL6IP6Q8N6S5 226 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 TMEM217Q8N7C4 229 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 SPSB1Q96BD6 273 aa11.88□□□□□ -0.51
HDAC7-228ENST00000548938 RBM24Q9BX46 236 aaKnown RBP11.88□□□□□ -0.51
HDAC7-228ENST00000548938 C3orf85A0A1B0GTC6 90 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 TRDCB7Z8K6 153 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 PROB1E7EW31 1015 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 RPL36A-HNRNPH2H7BZ11 118 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 NXPH3O95157 252 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 CDS2O95674 445 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 RNF224P0DH78 156 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 GLIPR1P48060 266 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 DYNLT3P51808 116 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 CXorf66Q5JRM2 361 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 SP5Q6BEB4 398 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 ODF3L1Q8IXM7 274 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 C10orf35Q96D05 121 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 GPHA2Q96T91 129 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 LYRM2Q9NU23 88 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 FOXD3Q9UJU5 478 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 DMDP11532 3685 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 A0A1B0GV90 55 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 BCAT2O15382 392 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 DUX1O43812 170 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 PIAS2O75928 621 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 HSPB1P04792 205 aaKnown RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 SHBQ15464 509 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 C10orf128Q5T292 105 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 PRAMEF20Q5VT98 475 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 CLDND2Q8NHS1 167 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF837Q96EG3 531 aaPredicted RBP11.87□□□□□ -0.51
HDAC7-228ENST00000548938 PLEKHF2Q9H8W4 249 aa11.87□□□□□ -0.51
HDAC7-228ENST00000548938 TERTO14746 1132 aaKnown RBP11.86□□□□□ -0.51
HDAC7-228ENST00000548938 MPPED1O15442 326 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 HSPA12AO43301 675 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 TMEM50AO95807 157 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 PPYP01298 95 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 FABP4P15090 132 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 UCP3P55916 312 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 HIST1H3AP68431 136 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 Q3ZCU0 254 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 HIST2H3PS2Q5TEC6 136 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 UBALD2Q8IYN6 164 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 BATF2Q8N1L9 274 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 FRZBQ92765 325 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 TMEM222Q9H0R3 208 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 CD63P08962 238 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 TRGC1P0CF51 173 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 BORCS8Q96FH0 119 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 TGIF2Q9GZN2 237 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 MYOTQ9UBF9 498 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 TCFL5Q9UL49 500 aa11.86□□□□□ -0.51
HDAC7-228ENST00000548938 FRYLO94915 3013 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 LOC102725191A0A1B0GVB3 256 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 OR5H1A6NKK0 313 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF732B4DXR9 585 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 DHHO43323 396 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ADAM20O43506 726 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 RBP2P50120 134 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
HDAC7-228ENST00000548938 VAMP2P63027 116 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 AKR1C8PQ5T2L2 129 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF100Q8IYN0 542 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 OSR2Q8N2R0 312 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 TMEM54Q969K7 222 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 UCN2Q96RP3 112 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 CALHM2Q9HA72 323 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 UFSP2Q9NUQ7 469 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 UBE2J1Q9Y385 318 aaPredicted RBP11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ASCC3Q8N3C0 2202 aaKnown RBP11.85□□□□□ -0.51
HDAC7-228ENST00000548938 TIAF1O95411 115 aa11.85□□□□□ -0.51
HDAC7-228ENST00000548938 ZNF154Q13106 437 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms