RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 OR11L1Q8NGX0 322 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 COQ8AQ8NI60 647 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 MARCH1Q8TCQ1 289 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 PIK3IP1Q96FE7 263 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 ELMOD3Q96FG2 381 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 MSL2Q9HCI7 577 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 Q9N2K0 584 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 CA10Q9NS85 328 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 DECR2Q9NUI1 292 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 SHPKQ9UHJ6 478 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 PCDHB10Q9UN67 800 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 NPTNQ9Y639 398 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 FRYQ5TBA9 3013 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 hCG_1807616A0A1W2PRN6 198 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 OR2AT4A6NND4 320 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 H0YL77 283 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 ABCD4O14678 606 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 HS3ST1O14792 307 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 SLC22A5O76082 557 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 OR2A4O95047 310 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 HLA-AP01891 365 aaKnown RBP11.39□□□□□ -0.59
PTCH1-215ENST00000547672 CTSDP07339 412 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-215ENST00000547672 ADH4P08319 380 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 HLA-GP17693 338 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 CD34P28906 385 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 GATA4P43694 442 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 GZMKP49863 264 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 NPY4RP50391 375 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
PTCH1-215ENST00000547672 CD300CQ08708 224 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 FGL1Q08830 312 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 DHRS2Q13268 280 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 Q6P435 159 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 VHLLQ6RSH7 139 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 WDR82Q6UXN9 313 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 ACP7Q6ZNF0 438 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 Q6ZR03 302 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 WDR86Q86TI4 376 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 FAM185AQ8N0U4 392 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 MUC20Q8N307 709 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-215ENST00000547672 OR11H7Q8NGC8 314 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 OR4A4PQ8NGN8 299 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 CA5BP1Q8WTZ4 195 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF486Q96H40 463 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-215ENST00000547672 WFIKKN1Q96NZ8 548 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 OR2A7Q96R45 310 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF2Q9BSG1 426 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-215ENST00000547672 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 RAB9BQ9NP90 201 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 C1orf123Q9NWV4 160 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 KCNIP1Q9NZI2 227 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 FZR1Q9UM11 496 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 VSIG4Q9Y279 399 aa11.39□□□□□ -0.59
PTCH1-215ENST00000547672 TRAV24A0A0B4J272 114 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 C9orf170A2RU37 121 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 DPRXA6NFQ7 191 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 F8VVB4 439 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 F8VWA3 439 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-215ENST00000547672 FABP7O15540 132 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 OR2H2O95918 312 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 HAND1O96004 215 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 CD3EP07766 207 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF728P0DKX0 622 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 IRF2P14316 349 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 AKR1C4P17516 323 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 ZBTB25P24278 435 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 CCKARP32238 428 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 DHODHQ02127 395 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 ABCA11PQ4W5N1 156 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 TRAT1Q6PIZ9 186 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 BRICD5Q6PL45 260 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 SGPP2Q8IWX5 399 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 C11orf53Q8IXP5 236 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 SLC38A6Q8IZM9 456 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 CCDC71LQ8N9Z2 235 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 UXS1Q8NBZ7 420 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 RDH5Q92781 318 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 DMRTB1Q96MA1 342 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 ZNF488Q96MN9 340 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 FYTTD1Q96QD9 318 aaKnown RBP11.38□□□□□ -0.59
PTCH1-215ENST00000547672 HDHD3Q9BSH5 251 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-215ENST00000547672 WDR13Q9H1Z4 485 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 TMEM165Q9HC07 324 aa11.38□□□□□ -0.59
PTCH1-215ENST00000547672 TMEM30CPA0ZSE6 113 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 FAM172BPA6NC97 362 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 LRRC30A6NM36 301 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 A8MV72 311 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-215ENST00000547672 THBDP07204 575 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 AGAP20933 346 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 VAMP1P23763 118 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 DUSP1P28562 367 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 FCGR2CP31995 323 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 TNFAIP6P98066 277 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-215ENST00000547672 BSPH1Q075Z2 132 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 PDCD1Q15116 288 aa11.37□□□□□ -0.59
PTCH1-215ENST00000547672 BEX5Q5H9J7 111 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms