RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 C10orf99Q6UWK7 81 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 COLCA1Q6ZS62 124 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 ZNF826PQ6ZT77 177 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 HDDC2Q7Z4H3 204 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 PATL1Q86TB9 770 aaKnown RBP3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 PRSS35Q8N3Z0 413 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 FAM216BQ8N7L0 139 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 OR5L1Q8NGL2 311 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 AENQ8WTP8 325 aaKnown RBP3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 PPP1R36Q96LQ0 422 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 ZIM3Q96PE6 472 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 OR52E6Q96RD3 313 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 CCL13Q99616 98 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 GFI1Q99684 422 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 SLC29A1Q99808 456 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 WACQ9BTA9 647 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 ZNF426Q9BUY5 554 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 FUNDC2Q9BWH2 189 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 TPT1P8Q9HAU6 139 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 MEPEQ9NQ76 525 aaPredicted RBP3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 POLE4Q9NR33 117 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 INIPQ9NRY2 104 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 C1orf123Q9NWV4 160 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 PRPF19Q9UMS4 504 aaKnown RBP3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 MYRFQ9Y2G1 1151 aa3.84□□□□□ -1.79
NPIPB4-219ENST00000543660 TRBV5-7A0A0A0MS05 114 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 A0A1W2PPK0 400 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 GMNCA6NCL1 334 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 MARCH11A6NNE9 402 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 ACOT8O14734 319 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 ALDOBP05062 364 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 CRYGBP07316 175 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 NR2C1P13056 603 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 SRMP19623 302 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 CA6P23280 308 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 GUCA1AP43080 201 aaPredicted RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 HAAOP46952 286 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 TGM4P49221 684 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 VEGFCP49767 419 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 FHITP49789 147 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 NCALDP61601 193 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 SCRN3Q0VDG4 424 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 SLAQ13239 276 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 GPR176Q14439 515 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 RGNQ15493 299 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 OR8G1Q15617 311 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 ODF4Q2M2E3 257 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 RSPO1Q2MKA7 263 aaPredicted RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 LIPKQ5VXJ0 399 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 TTC33Q6PID6 262 aaPredicted RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 UTS2BQ765I0 119 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 BCDIN3DQ7Z5W3 292 aaKnown RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 LHFPL4Q7Z7J7 247 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 COMMD2Q86X83 199 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 C4orf33Q8N1A6 199 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 DYNAPQ8N1N2 210 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 THAP8Q8NA92 274 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 OR1F12Q8NHA8 337 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 NDNFQ8TB73 568 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 THAP6Q8TBB0 222 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 TCP10LQ8TDR4 215 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 ACOT11Q8WXI4 607 aaPredicted RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 IFT81Q8WYA0 676 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 APOBEC3DQ96AK3 386 aaPredicted RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 SEH1LQ96EE3 360 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 ZNF503Q96F45 646 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 DUS3LQ96G46 650 aaKnown RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 RBP7Q96R05 134 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 P2RX4Q99571 388 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 MCHR1Q99705 422 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 C20orf24Q9BUV8 137 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 NDEL1Q9GZM8 345 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 TXNIPQ9H3M7 391 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 SEBOXQ9HB31 216 aaPredicted RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 PNRC2Q9NPJ4 139 aaKnown RBP3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 MBD2Q9UBB5 411 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 IKZF2Q9UKS7 526 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 GAB2Q9UQC2 676 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 ANGPT4Q9Y264 503 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 NDUFAF1Q9Y375 327 aa3.83□□□□□ -1.8
NPIPB4-219ENST00000543660 PRORSD1PA6NEY8 169 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 CPSF4LA6NMK7 179 aaKnown RBP3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 C5orf58C9J3I9 102 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 E5RGE8 158 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 H0YIZ8 118 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 H3BTX0 84 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 RHODO00212 210 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 HSPB6O14558 160 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 RER1O15258 196 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 MPPED1O15442 326 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 SYT7O43581 403 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 NDUFB3O43676 98 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 ITM2AO43736 263 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 GMDSO60547 372 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 OR7A10O76100 309 aa3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
NPIPB4-219ENST00000543660 MUC1P15941 1255 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms