RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 POM121Q96HA1 1249 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 LPAR3Q9UBY5 353 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 CDC42EP3Q9UKI2 254 aa12.8□□□□□ -0.36
DDB1-218ENST00000540784 TRAV24A0A0B4J272 114 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 A0A1W2PPH5 198 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 FUOMA2VDF0 154 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 SMIM30A4D0T7 59 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 AIPO00170 330 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 AVPP01185 164 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 RPL5P46777 297 aaKnown RBP12.79□□□□□ -0.36
DDB1-218ENST00000540784 QRFPP83859 136 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 EDDM3AQ14507 147 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 PAN3Q58A45 887 aaKnown RBP12.79□□□□□ -0.36
DDB1-218ENST00000540784 TMEM200BQ69YZ2 307 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 OR2W3Q7Z3T1 314 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 BPIFB2Q8N4F0 458 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 SUMF2Q8NBJ7 301 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 DPCDQ9BVM2 203 aaPredicted RBP12.79□□□□□ -0.36
DDB1-218ENST00000540784 BARHL1Q9BZE3 327 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 PPA2Q9H2U2 334 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 SPACA1Q9HBV2 294 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 OPN4Q9UHM6 478 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
DDB1-218ENST00000540784 ARHGAP32A7KAX9 2087 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A10PA6NDY2 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A18PA6NE21 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A16PA6NEW6 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A20PA6NIJ5 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A8PA6NJQ4 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A7PA6NKC0 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A22PA8MWA6 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 TMEM14DPA8MWL7 114 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A12PA8MX19 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A5PA8MXJ8 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A23PA8MXZ1 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 HSPB6O14558 160 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 TOX4O94842 621 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A15PP0C7V4 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A13PP0C7W8 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A14PP0C7W9 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 FAM90A24PP0C7X0 464 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 ERP29P30040 261 aaKnown RBP12.78□□□□□ -0.36
DDB1-218ENST00000540784 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
DDB1-218ENST00000540784 MEF2CQ06413 473 aaPredicted RBP12.78□□□□□ -0.36
DDB1-218ENST00000540784 AESQ08117 197 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 BLMHQ13867 455 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 CHRFAM7AQ494W8 412 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 METTL11BQ5VVY1 283 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 GPR107Q5VW38 600 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 METAP1DQ6UB28 335 aaPredicted RBP12.78□□□□□ -0.36
DDB1-218ENST00000540784 C1orf229Q6ZS94 237 aaPredicted RBP12.78□□□□□ -0.36
DDB1-218ENST00000540784 IL17RELQ6ZVW7 336 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 NR2C2APQ86WQ0 139 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 ANKRD13BQ86YJ7 626 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 NANPQ8TBE9 248 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 Q96M66 194 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 WDFY2Q96P53 400 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 URM1Q9BTM9 101 aaKnown RBP12.78□□□□□ -0.36
DDB1-218ENST00000540784 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 ZNF581Q9P0T4 197 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 PEX16Q9Y5Y5 336 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 KPTNQ9Y664 436 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 ABCA2Q9BZC7 2435 aa12.78□□□□□ -0.36
DDB1-218ENST00000540784 hADV38S2A0JD32 116 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 MCRIP1C9JLW8 97 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 CRLF1O75462 422 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 CSN2P05814 226 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 SLC2A2P11168 524 aaPredicted RBP12.77□□□□□ -0.37
DDB1-218ENST00000540784 FUT3P21217 361 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 CFPP27918 469 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 KCNJ3P48549 501 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 P2RX3P56373 397 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
DDB1-218ENST00000540784 UNC119Q13432 240 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 KRBOX4Q5JUW0 171 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 BRICD5Q6PL45 260 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 C1orf122Q6ZSJ8 110 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 PCGF1Q9BSM1 259 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 KCNK15Q9H427 330 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 LIN7BQ9HAP6 207 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 ING3Q9NXR8 418 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 FBLN5Q9UBX5 448 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 DAPK2Q9UIK4 370 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.77□□□□□ -0.375e-8■■■□□ 17.1
DDB1-218ENST00000540784 HIVEP2P31629 2446 aa12.77□□□□□ -0.37
DDB1-218ENST00000540784 hCG_1809904A0A1W2PP81 198 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 A0A1W2PPE2 198 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 A0A1W2PR64 198 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 A0A1W2PRV1 198 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 GLAP06280 429 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 TGFBR1P36897 503 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
DDB1-218ENST00000540784 GLIPR1P48060 266 aa12.76□□□□□ -0.37
DDB1-218ENST00000540784 VBP1P61758 197 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms