RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 MT-ND2P03891 347 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 LPLP06858 475 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 CEACAM3P40198 252 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 PTGFRP43088 359 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 RASSF2P50749 326 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 CCR9P51686 369 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 SCN1BQ07699 218 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 KPNB1Q14974 876 aaKnown RBP11.28□□□□□ -0.6
SNHG1-213ENST00000540725 HLA-DRB5Q30154 266 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 OR13C3Q8NGS6 347 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 TRUB1Q8WWH5 349 aaKnown RBP11.28□□□□□ -0.6
SNHG1-213ENST00000540725 RNFT2Q96EX2 444 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 COQ2Q96H96 371 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 RBM14Q96PK6 669 aaKnown RBP11.28□□□□□ -0.6
SNHG1-213ENST00000540725 NEK6Q9HC98 313 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 TSSC4Q9Y5U2 329 aaPredicted RBP11.28□□□□□ -0.6
SNHG1-213ENST00000540725 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 J3QRE1 110 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 TOR1AO14656 332 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 PF4P02776 101 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 CSN2P05814 226 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 Q6P435 159 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 SAXO1Q8IYX7 474 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 CHST4Q8NCG5 386 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 OR4X2Q8NGF9 303 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 OR4D6Q8NGJ1 314 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 MYDGFQ969H8 173 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 CREB3L1Q96BA8 519 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 PELI1Q96FA3 418 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 RHOFQ9HBH0 211 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 ING3Q9NXR8 418 aa11.27□□□□□ -0.61
SNHG1-213ENST00000540725 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
SNHG1-213ENST00000540725 ZNF729A6NN14 1252 aaPredicted RBP11.26□□□□□ -0.61
SNHG1-213ENST00000540725 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 J3QLW9 94 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 SLC33A1O00400 549 aaPredicted RBP11.26□□□□□ -0.61
SNHG1-213ENST00000540725 AMY1AP04745 511 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 AMY2AP04746 511 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 ZNF19P17023 458 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 PRRX1P54821 245 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 ALKBH1Q13686 389 aaKnown RBP11.26□□□□□ -0.61
SNHG1-213ENST00000540725 RBM39Q14498 530 aaKnown RBP11.26□□□□□ -0.61
SNHG1-213ENST00000540725 ATXN7L3Q14CW9 347 aaPredicted RBP11.26□□□□□ -0.61
SNHG1-213ENST00000540725 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 ACBD7Q8N6N7 88 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 HRASLS5Q96KN8 279 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 C4orf36Q96KX1 117 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 ZCCHC4Q9H5U6 513 aa11.26□□□□□ -0.61
SNHG1-213ENST00000540725 TENM3Q9P273 2699 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 A0A087X0M5 115 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 A0A1B0GX30 115 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 OOSP1A8MZH6 123 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 LY6LH3BQJ8 138 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 DEGS1O15121 323 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 ATP5HO75947 161 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 MPIG6BO95866 241 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 ALPLP05186 524 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 NFYBP25208 207 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 MNDAP41218 407 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 OR3A4PP47883 348 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 SNRPGP62308 76 aaKnown RBP11.25□□□□□ -0.61
SNHG1-213ENST00000540725 SLC35A2P78381 396 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 C17orf58Q2M2W7 97 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 C9orf152Q5JTZ5 239 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 UTF1Q5T230 341 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 MEDAGQ5VYS4 303 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 CCDC144NLQ6NUI1 221 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 PPIL3Q9H2H8 161 aaKnown RBP11.25□□□□□ -0.61
SNHG1-213ENST00000540725 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 MYRFQ9Y2G1 1151 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 ORC6Q9Y5N6 252 aa11.25□□□□□ -0.61
SNHG1-213ENST00000540725 M0QZK8 103 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 CIB2O75838 187 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 HCKP08631 526 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 TMEM225BP0DP42 221 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 GLP1RP43220 463 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 ZP1P60852 638 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 KISS1Q15726 138 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 ZSCAN26Q16670 478 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 OR9G1Q8NH87 305 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 LGALS12Q96DT0 336 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 MRPL48Q96GC5 212 aaKnown RBP11.24□□□□□ -0.61
SNHG1-213ENST00000540725 RCC1LQ96I51 464 aaKnown RBP11.24□□□□□ -0.61
SNHG1-213ENST00000540725 KIRREL1Q96J84 757 aa11.24□□□□□ -0.61
SNHG1-213ENST00000540725 EXOGQ9Y2C4 368 aaKnown RBP11.24□□□□□ -0.61
SNHG1-213ENST00000540725 KBTBD11-OT1A0A1B0GTJ5 212 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 SNTNA6NMZ2 147 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 H0YJX3 145 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 K7EIL1 84 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 HSPB6O14558 160 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 EI24O14681 340 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 SULT1B1O43704 296 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 CLIC3O95833 236 aa11.23□□□□□ -0.61
SNHG1-213ENST00000540725 DBTP11182 482 aaKnown RBP11.23□□□□□ -0.61
SNHG1-213ENST00000540725 MTNR1BP49286 362 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms