RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 PRDX2P32119 198 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 TNFSF8P32971 234 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 NR4A2P43354 598 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 KCNJ3P48549 501 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 CEBPDP49716 269 aaPredicted RBP8.77□□□□□ -1.01
VPS33A-204ENST00000540669 LMO4P61968 165 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF79Q15937 498 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 MICBQ29980 383 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF260Q3ZCT1 412 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 CNIH2Q6PI25 160 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 CLEC2AQ6UVW9 174 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 LYPD2Q6UXB3 125 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 TCF23Q7RTU1 214 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 C19orf18Q8NEA5 215 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 OR4M1Q8NGD0 313 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 OR10R2Q8NGX6 335 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 COQ2Q96H96 371 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 S100A13Q99584 98 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 NCOR1P1Q9H4R4 102 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 SPACA1Q9HBV2 294 aa8.77□□□□□ -1.01
VPS33A-204ENST00000540669 HIVEP1P15822 2718 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 MED13LQ71F56 2210 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 TRBV6-6A0A0A6YYG2 114 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 POM121CA8CG34 1229 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 KIAA1324LA8MWY0 1029 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF205O95201 554 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 GSTP1P09211 210 aaKnown RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 WNT2P09544 360 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 SLC25A16P16260 332 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 FUT3P21217 361 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 PTBP1P26599 531 aaKnown RBP eCLIP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 DUSP1P28562 367 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 GPR6P46095 362 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 IL13RA1P78552 427 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 PAX2Q02962 417 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 KCNJ8Q15842 424 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 C11orf91Q3C1V1 193 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 AVPI1Q5T686 147 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 RSBN1Q5VWQ0 802 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF880Q6PDB4 577 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 METAP1DQ6UB28 335 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 FIP1L1Q6UN15 594 aaKnown RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 OR8H2Q8N162 312 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF561Q8N587 486 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 SPICQ8N5J4 248 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 FAM216BQ8N7L0 139 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 FAM168AQ92567 244 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 RAB1CQ92928 201 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 TIMD4Q96H15 378 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 ARHGAP5-AS1Q96IT6 56 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 SULT4A1Q9BR01 284 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 PECRQ9BY49 303 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 C6orf62Q9GZU0 229 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 AUNIPQ9H7T9 357 aa8.76□□□□□ -1.01
VPS33A-204ENST00000540669 ELL3Q9HB65 397 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 PATZ1Q9HBE1 687 aaKnown RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
VPS33A-204ENST00000540669 IGHV4-61A0A0C4DH41 118 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 METTL21EPA6NDL7 271 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 SERPINE3A8MV23 424 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 H3BUI4 141 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 CTDSPLO15194 276 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 PPIHO43447 177 aaKnown RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 SSX5O60225 188 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 OR7C1O76099 320 aaPredicted RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 GYPAP02724 150 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 TK1P04183 234 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 FOSL1P15407 271 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 GABRR1P24046 479 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 ERP29P30040 261 aaKnown RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 VEGFCP49767 419 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 TAS2R20P59543 309 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 COL10A1Q03692 680 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 IKZF1Q13422 519 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 CLEC12BQ2HXU8 276 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 CR1LQ2VPA4 569 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 SFRP4Q6FHJ7 346 aaPredicted RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 BAIAP2L2Q6UXY1 529 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF497Q6ZNH5 498 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 Q6ZS49 121 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 C6orf201Q7Z4U5 140 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 SUMF2Q8NBJ7 301 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 OR4S1Q8NGB4 309 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 OR5T2Q8NGG2 359 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 CLDND2Q8NHS1 167 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 C8orf46Q8TAG6 207 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 PLPPR1Q8TBJ4 325 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 SNX22Q96L94 193 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 Q96MF0 132 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 CCL13Q99616 98 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 PIMREGQ9BSJ6 248 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 DPCDQ9BVM2 203 aaPredicted RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 ZNF665Q9H7R5 613 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 LINC00574Q9H8X3 128 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 MBNL3Q9NUK0 354 aaKnown RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 RABL2AQ9UBK7 228 aaPredicted RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 DNAJB11Q9UBS4 358 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 RABL2BQ9UNT1 228 aa8.75□□□□□ -1.01
VPS33A-204ENST00000540669 RBMX2Q9Y388 322 aaKnown RBP8.75□□□□□ -1.01
VPS33A-204ENST00000540669 TLN2Q9Y4G6 2542 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms