RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	GAL3ST2	Q9H3Q3	398 aa		10.53	□□□□□ -0.72
SEMA4D-223	ENST00000540475	LINC00574	Q9H8X3	128 aa		10.53	□□□□□ -0.72
SEMA4D-223	ENST00000540475	RPL36	Q9Y3U8	105 aa	Known RBP	10.53	□□□□□ -0.72
SEMA4D-223	ENST00000540475	TRGV10	A0A0A0MS01	117 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ODAM	A1E959	279 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	LY6L	H3BQJ8	138 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	SIRPB1	O00241	398 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	WBP4	O75554	376 aa	Known RBP	10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	GLIPR1	P48060	266 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	MTNR1B	P49286	362 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	AES	Q08117	197 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	DYNC1I2	Q13409	638 aa	Known RBP	10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	CCDC58	Q4VC31	144 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	C16orf82	Q7Z2V1	217 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	TMEM219	Q86XT9	240 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ABHD12	Q8N2K0	398 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OR51T1	Q8NGJ9	327 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OR5AK2	Q8NH90	309 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ZNF596	Q8TC21	504 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	COQ2	Q96H96	371 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	PDCD1LG2	Q9BQ51	273 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OCSTAMP	Q9BR26	566 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	AMBN	Q9NP70	447 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	DPM3	Q9P2X0	92 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	PCDHGB5	Q9Y5G0	923 aa		10.52	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ADARB2-AS1	A8MUL3	147 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ALDOB	P05062	364 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OCM2	P0CE71	109 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OCM	P0CE72	109 aa	Predicted RBP	10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	JUNB	P17275	347 aa	Predicted RBP	10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	CDK2	P24941	298 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	GBX2	P52951	348 aa	Predicted RBP	10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	BLCAP	P62952	87 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	EMX1	Q04741	257 aa	Predicted RBP	10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	IL18R1	Q13478	541 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	HABP2	Q14520	560 aa	Predicted RBP	10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	C17orf58	Q2M2W7	97 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	PLA1A	Q53H76	456 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	SAMD5	Q5TGI4	173 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ZNF691	Q5VV52	312 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	BAIAP2L2	Q6UXY1	529 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475		Q6ZS46	218 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OR5D18	Q8NGL1	313 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	RGP1	Q92546	391 aa	Predicted RBP	10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	LIN7B	Q9HAP6	207 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	DHDH	Q9UQ10	334 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	HILPDA	Q9Y5L2	63 aa		10.51	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ZNF729	A6NN14	1252 aa	Predicted RBP	10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	LEUTX	A8MZ59	168 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	F2RL2	O00254	374 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	DEGS1	O15121	323 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	HCK	P08631	526 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	VSIG10L2	P0DP72	767 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	GDNF	P39905	211 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	GTF2A1	P52655	376 aa	Predicted RBP	10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	SNU13	P55769	128 aa	Known RBP	10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	SLC34A1	Q06495	639 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	IL13RA2	Q14627	380 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	BEAN1	Q3B7T3	259 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	KRBOX4	Q5JUW0	171 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	PRAMEF5	Q5TYX0	476 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	RPL22L1	Q6P5R6	122 aa	Known RBP	10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	TRAPPC6B	Q86SZ2	158 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	NDUFA11	Q86Y39	141 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	CREB3L1	Q96BA8	519 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	CPNE2	Q96FN4	548 aa	Predicted RBP	10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	NKX3-1	Q99801	234 aa	Predicted RBP	10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	IFT22	Q9H7X7	185 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ZNF286A	Q9HBT8	521 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OR6C3	Q9NZP0	311 aa		10.5	□□□□□ -0.73
SEMA4D-223	ENST00000540475	TRAV24	A0A0B4J272	114 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OOSP1	A8MZH6	123 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	NPIPB11	E5RHQ5	1161 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	BUB1B-PAK6	H3BSN5	160 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475		H3BUI4	141 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	GABRP	O00591	440 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	OGG1	O15527	345 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	FBXO24	O75426	580 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	TMEM225B	P0DP42	221 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	CD28	P10747	220 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	ZNF44	P15621	663 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	RAB3A	P20336	220 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	DCK	P27707	260 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	PTGFR	P43088	359 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	KCNJ3	P48549	501 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	HLA-DRB5	Q30154	266 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	NHLRC3	Q5JS37	347 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	HIST2H2BD	Q6DRA6	164 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	C11orf44	Q8N8P7	122 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	NDNF	Q8TB73	568 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	CNIH3	Q8TBE1	160 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	GPR148	Q8TDV2	347 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	PPIL3	Q9H2H8	161 aa	Known RBP	10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	SMPD3	Q9NY59	655 aa	Predicted RBP	10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	IL36G	Q9NZH8	169 aa		10.49	□□□□□ -0.73
SEMA4D-223	ENST00000540475	FAM90A18P	A6NE21	464 aa		10.48	□□□□□ -0.73
SEMA4D-223	ENST00000540475	FAM90A16P	A6NEW6	464 aa		10.48	□□□□□ -0.73
SEMA4D-223	ENST00000540475	FAM90A20P	A6NIJ5	464 aa		10.48	□□□□□ -0.73
SEMA4D-223	ENST00000540475	FAM90A9P	A6NNJ1	464 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms