RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 STATHP02808 62 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ALOX5APP20292 161 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF117Q03924 483 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF92Q03936 586 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 KIR2DS5Q14953 304 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 Q6ZWC4 215 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 DPY19L4Q7Z388 723 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ASB5Q8WWX0 329 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 RBMXL1Q96E39 390 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC25A44Q96H78 314 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 RASL10BQ96S79 203 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 AICDAQ9GZX7 198 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 CALHM2Q9HA72 323 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 TMEM9BQ9NQ34 198 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF701Q9NV72 531 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ST3GAL6Q9Y274 331 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 CLEC18AA5D8T8 446 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ARPC3O15145 178 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 MMP23AO75900 390 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 DBIP07108 87 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 HHEXQ03014 270 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 PLAURQ03405 335 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 UNC119Q13432 240 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 C1orf100Q5SVJ3 147 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 LHFPL1Q86WI0 220 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 CATSPERDQ86XM0 798 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 CLEC18CQ8NCF0 446 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 IMMP2LQ96T52 175 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 SRA1Q9HD15 236 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 FBXO34Q9NWN3 711 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 LRP4O75096 1905 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 KIF26BQ2KJY2 2108 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 NSG1A0A0A6YYJ2 146 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 MAP1LC3B2A6NCE7 125 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 FGF17O60258 216 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 DDAH2O95865 285 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 PEBP1P30086 187 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 GALR1P47211 349 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 CAPZBP47756 277 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 HLA-BQ31612 363 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 TRIM61Q5EBN2 209 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 PEAR1Q5VY43 1037 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 RAB42Q8N4Z0 105 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 OR2A1Q8NGT9 310 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 VN1R17PQ8TDU5 208 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 SMIM12Q96EX1 92 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 MAP1LC3BQ9GZQ8 125 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 WDR76Q9H967 626 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 GPR84Q9NQS5 396 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 OR6C3Q9NZP0 311 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC45A2Q9UMX9 530 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 MRPS28Q9Y2Q9 187 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 ARID1BQ8NFD5 2236 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 TRAV30A0A087WSZ9 112 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 LOC102724200A0A096LPH7 203 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 MEGF11A6BM72 1044 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 LILRA1O75019 489 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 SYNGR4O95473 234 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 CTXN2P0C2S0 81 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 MYF5P13349 255 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 FSTP19883 344 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 APOBEC3AP31941 199 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 CDKN1AP38936 164 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 MORN2Q502X0 79 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 DPPA3Q6W0C5 159 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 OR5H2Q8NGV7 314 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 RHBDD1Q8TEB9 315 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 APH1AQ96BI3 265 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 ARRDC1-AS1Q9H2J1 176 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 ELOVL3Q9HB03 270 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 Q9N2K0 584 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 EHFQ9NZC4 300 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 CES1P1Q9UKY3 287 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 B3GALT5Q9Y2C3 310 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 RHBDD3Q9Y3P4 386 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 PRR33A8MZF0 331 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 SDCBPO00560 298 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC48A1Q6P1K1 146 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 FDX2Q6P4F2 183 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 ZNF709Q8N972 641 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 OR4D5Q8NGN0 318 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 OR10G6Q8NH81 332 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 ABHD3Q8WU67 409 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 RAB11FIP5Q9BXF6 653 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 PELI2Q9HAT8 420 aa8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-243ENST00000540387 IGKV1-8A0A0C4DH67 115 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 WDR1O75083 606 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 TCN2P20062 427 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 FASLGP48023 281 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 CSNK1A1P48729 337 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 UBE2NP61088 152 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 PRDX1Q06830 199 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 ADIRFQ15847 76 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 OTPQ5XKR4 325 aa8.24□□□□□ -1.09
CTNNA1-243ENST00000540387 TMEM108Q6UXF1 575 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms