RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ERVFC1-1P60608 527 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 MICBQ29980 383 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 DCAF10Q5QP82 559 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 LYG1Q8N1E2 194 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 MRGPRDQ8TDS7 321 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 MAP1LC3BQ9GZQ8 125 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 OR3A1P47881 315 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 TMEM37Q8WXS4 190 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 TOLLIPQ9H0E2 274 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 CCL3P10147 92 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 OR4D10Q8NGI6 311 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 PLXNB2O15031 1838 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 COL11A1P12107 1806 aaPredicted RBP12.78□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF638Q14966 1978 aaKnown RBP12.78□□□□□ -0.36
CACNB1-206ENST00000539338 PRF1P14222 555 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 FABP4P15090 132 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 PPP1CBP62140 327 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 LSM6P62312 80 aaKnown RBP12.78□□□□□ -0.36
CACNB1-206ENST00000539338 TBC1D26Q86UD7 250 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 ADAT3Q96EY9 351 aaPredicted RBP12.78□□□□□ -0.36
CACNB1-206ENST00000539338 SCMH1Q96GD3 660 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 GPR27Q9NS67 375 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 HSD17B13Q7Z5P4 300 aaPredicted RBP12.77□□□□□ -0.36
CACNB1-206ENST00000539338 SLC25A42Q86VD7 318 aa12.77□□□□□ -0.36
CACNB1-206ENST00000539338 RNF133Q8WVZ7 376 aa12.77□□□□□ -0.36
CACNB1-206ENST00000539338 SLC25A22Q9H936 323 aa12.77□□□□□ -0.36
CACNB1-206ENST00000539338 BVESQ8NE79 360 aa12.77□□□□□ -0.36
CACNB1-206ENST00000539338 LRRC29Q8WV35 223 aa12.77□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF66Q6ZN08 573 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 SLC26A10Q8NG04 563 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 OR13G1Q8NGZ3 307 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 PPIHO43447 177 aaKnown RBP12.77□□□□□ -0.37
CACNB1-206ENST00000539338 IGHV4-34P06331 123 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 CSRP3P50461 194 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 KRTDAPP60985 99 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 GAB4Q2WGN9 574 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 MOB3BQ86TA1 216 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 TUSC5Q8IXB3 177 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 ZNF721Q8TF20 911 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 CHAC2Q8WUX2 184 aa12.77□□□□□ -0.37
CACNB1-206ENST00000539338 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 SAP25Q8TEE9 199 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
CACNB1-206ENST00000539338 ZNF426Q9BUY5 554 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 SH2D7A6NKC9 451 aaPredicted RBP12.76□□□□□ -0.37
CACNB1-206ENST00000539338 DYRK2Q92630 601 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 STARD10Q9Y365 291 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 SLC31A2O15432 143 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 TOX4O94842 621 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 CD200P41217 278 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 DYNLT3P51808 116 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 HFEQ30201 348 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 NDUFB3O43676 98 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 ANKRD34CP0C6C1 535 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 LIMS1P48059 325 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 ZXDCQ2QGD7 858 aaPredicted RBP12.76□□□□□ -0.37
CACNB1-206ENST00000539338 OR10D4PQ8NGN7 298 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 RP1P56715 2156 aa12.76□□□□□ -0.37
CACNB1-206ENST00000539338 SPINK4O60575 86 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 BCL3P20749 454 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
CACNB1-206ENST00000539338 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
CACNB1-206ENST00000539338 MSRB2Q9Y3D2 182 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 MRPS18BQ9Y676 258 aaKnown RBP12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ARL2-SNX15V9GYD0 113 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ZNF737O75373 536 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 OPN1MWP04001 364 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 OPN1MW2P0DN77 364 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 OPN1MW3P0DN78 364 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 IL11P20809 199 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 F2RP25116 425 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 PIGYQ3MUY2 71 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ABHD3Q8WU67 409 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 MS4A7Q9GZW8 240 aaPredicted RBP12.75□□□□□ -0.37
CACNB1-206ENST00000539338 WDR54Q9H977 334 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 HES4Q9HCC6 221 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 CLDN34H7C241 214 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ACTL6AO96019 429 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 ACP1P24666 158 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 FAM181AQ8N9Y4 354 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 FBLIM1Q8WUP2 373 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
CACNB1-206ENST00000539338 CACFD1Q9UGQ2 172 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 TRAPPC1Q9Y5R8 145 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 CKAP5Q14008 2032 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 OR5B21A6NL26 309 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 DBX1A6NMT0 343 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 CDRT15L2A8MXV6 281 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 LTBRP36941 435 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 MAGEA5P43359 124 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 SURF2Q15527 256 aaPredicted RBP12.75□□□□□ -0.37
CACNB1-206ENST00000539338 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 LRRC10Q5BKY1 277 aa12.75□□□□□ -0.37
CACNB1-206ENST00000539338 C1orf185Q5T7R7 199 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms