RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CIB1Q99828 191 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 ASB7Q9H672 318 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 LRRC19Q9H756 370 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 PLEKHA1Q9HB21 404 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 RHOFQ9HBH0 211 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 C12orf4Q9NQ89 552 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 VAPAQ9P0L0 249 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 TAC3Q9UHF0 121 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 CYB5R1Q9UHQ9 305 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 MRM2Q9UI43 246 aaKnown RBP1.31□□□□□ -2.2
CCDC7-209ENST00000539197 PRO0628Q9UI54 55 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 NAGKQ9UJ70 344 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 ENPP5Q9UJA9 477 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 SLC7A11Q9UPY5 501 aa1.31□□□□□ -2.2
CCDC7-209ENST00000539197 KLF13Q9Y2Y9 288 aaPredicted RBP1.31□□□□□ -2.2
CCDC7-209ENST00000539197 PRRC2BQ5JSZ5 2229 aaKnown RBP1.31□□□□□ -2.2
CCDC7-209ENST00000539197 GOLGA8QA0A0J9YX86 632 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 LINC00854A0A1B0GVQ3 168 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 RBFOX3A6NFN3 312 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF729A6NN14 1252 aaPredicted RBP1.3□□□□□ -2.2
CCDC7-209ENST00000539197 G3V3Q6 166 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 K7ERQ8 282 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 OR2A4O95047 310 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 CST4P01036 141 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 NPPAP01160 153 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 TRGV3P03979 118 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 RLN2P04090 185 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 GIMD1P0DJR0 217 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 CRABP2P29373 138 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 DNASE1L1P49184 302 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 STX3Q13277 289 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 PSG3Q16557 428 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 CEACAM16Q2WEN9 425 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 ACTBL2Q562R1 376 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 IDNKQ5T6J7 187 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 DRAXINQ8NBI3 349 aaPredicted RBP1.3□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF738Q8NE65 137 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 OR2AE1Q8NHA4 323 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 OR5P2Q8WZ92 322 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 SMIM8Q96KF7 97 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 OR2A7Q96R45 310 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 VAT1Q99536 393 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 PRORYQ9H606 182 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 RBM22Q9NW64 420 aaKnown RBP eCLIP1.3□□□□□ -2.2
CCDC7-209ENST00000539197 MRPL16Q9NX20 251 aaKnown RBP1.3□□□□□ -2.2
CCDC7-209ENST00000539197 RBM12B-AS1Q9P1G2 102 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF337Q9Y3M9 751 aa1.3□□□□□ -2.2
CCDC7-209ENST00000539197 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
CCDC7-209ENST00000539197 LTBP2Q14767 1821 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 KMT2BQ9UMN6 2715 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TRGV4A0A0C4DH28 118 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 M0QX08 132 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 UPK1AO00322 258 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TCAPO15273 167 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 YKT6O15498 198 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 SHOX2O60902 331 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-209ENST00000539197 IGKV5-2P06315 115 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 P0DMU3 169 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 FAM231AP0DMU4 169 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 FAM231CP0DMU5 169 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TAC1P20366 129 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 M6PRP20645 277 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 IL12BP29460 328 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 HTR2BP41595 481 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 MAGEA3P43357 314 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF83P51522 516 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 SLC18A1P54219 525 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 XRCC4Q13426 336 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 LINC00303Q3SY05 128 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 Q6ZT83 130 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 AHSA2Q719I0 299 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 SSX6Q7RTT6 188 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 LYZL2Q7Z4W2 148 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 CYP4Z2PQ8N1L4 340 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 OR8G5Q8NG78 346 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 OR8K1Q8NGG5 319 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 OR2K2Q8NGT1 345 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 OR51Q1Q8NH59 317 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TMEM239Q8WW34 195 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 FMC1Q96HJ9 113 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 CATSPER2Q96P56 530 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 OR2M4Q96R27 311 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 SRRQ9GZT4 340 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 NXF2Q9GZY0 626 aaKnown RBP1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TXNIPQ9H3M7 391 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 GOLPH3Q9H4A6 298 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 POMKQ9H5K3 350 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TMBIM4Q9HC24 238 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 TREM1Q9NP99 234 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 IFT46Q9NQC8 304 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 INSIG2Q9Y5U4 225 aa1.29□□□□□ -2.2
CCDC7-209ENST00000539197 ZNF706Q9Y5V0 76 aaPredicted RBP1.29□□□□□ -2.2
CCDC7-209ENST00000539197 BRCA1P38398 1863 aaKnown RBP1.29□□□□□ -2.2
CCDC7-209ENST00000539197 IGHV3-21A0A0B4J1V1 117 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 LOC389332A0A1B0GUA5 103 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 A0A1B0GXF2 115 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 OR2AT4A6NND4 320 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 CDIPTO14735 213 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 BRI3O95415 125 aa1.28□□□□□ -2.2
CCDC7-209ENST00000539197 NQO2P16083 231 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms