RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 DSCAMO60469 2012 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 PPIAL4EA0A075B759 164 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 A0A1W2PPR1 153 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 MEIOCA2RUB1 952 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 MEIS3P1A6NDR6 274 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 PPIAL4DF5H284 164 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 C3orf80F5H4A9 247 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 TMEM178BH3BS89 294 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 HPXP02790 462 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 PPIAL4FP0DN26 164 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 DTYMKP23919 212 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 PRDX2P32119 198 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 ASAH1Q13510 395 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 C14orf79Q96F83 325 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 EDARQ9UNE0 448 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 RBMX2Q9Y388 322 aaKnown RBP12.95□□□□□ -0.34
VAMP1-207ENST00000539047 PPIAL4AQ9Y536 164 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
VAMP1-207ENST00000539047 CELSR2Q9HCU4 2923 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 IGHV3OR15-7A0A075B7D8 119 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 NAP1L6A6NFF2 107 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 SLC33A1O00400 549 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-207ENST00000539047 ORC5O43913 435 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 PSG2P11465 335 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 DAOP14920 347 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 AMY2BP19961 511 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 TBPP20226 339 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 SSTR2P30874 369 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 TAS2R46P59540 309 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 DYRK1AQ13627 763 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 SHEQ5VZ18 495 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 TEX36Q5VZQ5 186 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 OLFML2AQ68BL7 652 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 SFRP4Q6FHJ7 346 aaPredicted RBP12.94□□□□□ -0.34
VAMP1-207ENST00000539047 Q6P435 159 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 DNM1P46Q6ZS02 220 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 MOB1BQ7L9L4 216 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF561Q8N587 486 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 ENKURQ8TC29 256 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 DNTTIP1Q9H147 329 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 KLK11Q9UBX7 282 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 MGAT4AQ9UM21 535 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 CACNG2Q9Y698 323 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 ITPR2Q14571 2701 aa12.94□□□□□ -0.34
VAMP1-207ENST00000539047 TRAV24A0A0B4J272 114 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 ANKRD20A5PA0PJZ0 165 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 FUOMA2VDF0 154 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 POM121CA8CG34 1229 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF736B4DX44 427 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-207ENST00000539047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-207ENST00000539047 LYRM1O43325 122 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 NDUFA2O43678 99 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 PTTG1O95997 202 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 AKAIN1P0CW23 69 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 LMO1P25800 156 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 CDKN1AP38936 164 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 CEBPDP49716 269 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-207ENST00000539047 COL10A1Q03692 680 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 MEF2DQ14814 521 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 STUMQ69YW2 141 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 BRICD5Q6PL45 260 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 SLC36A1Q7Z2H8 476 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 MUC20Q8N307 709 aaPredicted RBP12.93□□□□□ -0.34
VAMP1-207ENST00000539047 TMEM229BQ8NBD8 167 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 RAB1CQ92928 201 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 MED30Q96HR3 178 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 OCSTAMPQ9BR26 566 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 PLEKHF2Q9H8W4 249 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF286AQ9HBT8 521 aa12.93□□□□□ -0.34
VAMP1-207ENST00000539047 TMEM30CPA0ZSE6 113 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 LANCL1O43813 399 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 SSX5O60225 188 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 FCGR3AP08637 254 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 EFNA4P52798 201 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 ARPC4P59998 168 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 BTG1P62324 171 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 IL13RA1P78552 427 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 ATXN7L3Q14CW9 347 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-207ENST00000539047 GRK1Q15835 563 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 CHRFAM7AQ494W8 412 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 RNASE10Q5GAN6 216 aaKnown RBP12.92□□□□□ -0.34
VAMP1-207ENST00000539047 DCDC5Q6ZRR9 648 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 BPIFB2Q8N4F0 458 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 DEFB108BQ8NET1 73 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 BEST4Q8NFU0 473 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 OR5T2Q8NGG2 359 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 OR5D13Q8NGL4 314 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 SNX22Q96L94 193 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
VAMP1-207ENST00000539047 MCUBQ9NWR8 336 aa12.92□□□□□ -0.34
VAMP1-207ENST00000539047 ZNF581Q9P0T4 197 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms