RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 RCC1P18754 421 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 PVALBP20472 110 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 F2RL1P55085 397 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 OR8B8Q15620 311 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 TOMM40LQ969M1 308 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 ALKBH3Q96Q83 286 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 ST3GAL6Q9Y274 331 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 XRCC2O43543 280 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
CDCA3-207ENST00000538862 FBXO24O75426 580 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 NME2P22392 152 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 TBR1Q16650 682 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 GPR157Q5UAW9 335 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 TMEM211Q6ICI0 200 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 ALKBH2Q6NS38 261 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 SLC22A25Q6T423 547 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 FBXL14Q8N1E6 418 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 OR10D3Q8NH80 312 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 WNT2BQ93097 391 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 C18orf12Q96KH6 178 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 ADAT1Q9BUB4 502 aaKnown RBP12.55□□□□□ -0.4
CDCA3-207ENST00000538862 GPR35Q9HC97 309 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 SPTA1P02549 2419 aa12.55□□□□□ -0.4
CDCA3-207ENST00000538862 ZNF816-ZNF321PA0A0X1KG74 233 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 PDCD6O75340 191 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MBPP02686 304 aaPredicted RBP12.54□□□□□ -0.4
CDCA3-207ENST00000538862 FAM87AP0C7U9 286 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 PATE4P0C8F1 98 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 NPBWR1P48145 328 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 DVL1P1P54792 670 aaPredicted RBP12.54□□□□□ -0.4
CDCA3-207ENST00000538862 ZNF92Q03936 586 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MALLQ13021 153 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 PIGYQ3MUY2 71 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 NRN1LQ496H8 165 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 PPP1R32Q7Z5V6 425 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 SPSB4Q96A44 273 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MOB3AQ96BX8 217 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 SLC2A9Q9NRM0 540 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 FAM212BQ9NTI7 297 aaPredicted RBP12.54□□□□□ -0.4
CDCA3-207ENST00000538862 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 FAM96BQ9Y3D0 163 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 COL6A6A6NMZ7 2263 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 NCKAP5O14513 1909 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 LRRC3CA6NJW4 275 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MASP2O00187 686 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 CYTIPO60759 359 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 SCGB1D2O95969 90 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 RFPL3SP0C7P2 107 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 Q0VFX4 171 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 DEFB109BQ30KR1 87 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 SP6Q3SY56 376 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 SKA3Q8IX90 412 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 LGI3Q8N145 548 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 FGFBP3Q8TAT2 258 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MARS2Q96GW9 593 aaKnown RBP12.54□□□□□ -0.4
CDCA3-207ENST00000538862 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MLXQ9UH92 298 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 MED13Q9UHV7 2174 aa12.54□□□□□ -0.4
CDCA3-207ENST00000538862 FASNP49327 2511 aaKnown RBP12.53□□□□□ -0.4
CDCA3-207ENST00000538862 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 GPR137BO60478 399 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 MMP7P09237 267 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-207ENST00000538862 SFTA3P0C7M3 94 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 FUT3P21217 361 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 DUSP1P28562 367 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 GLP1RP43220 463 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 RBM11P57052 281 aaKnown RBP12.53□□□□□ -0.4
CDCA3-207ENST00000538862 IL13RA2Q14627 380 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 SWI5Q1ZZU3 235 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 FAM76BQ5HYJ3 339 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 PLCXD3Q63HM9 321 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 Q6ZRG5 221 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 Q8NFD4 153 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 GLYATL2Q8WU03 294 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 PIGCQ92535 297 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 CPNE4Q96A23 557 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-207ENST00000538862 TMEM45BQ96B21 275 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 RSRP1Q9BUV0 290 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 C1QTNF5Q9BXJ0 243 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 PRDM14Q9GZV8 571 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 STARD10Q9Y365 291 aa12.53□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A10PA6NDY2 464 aa12.52□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A18PA6NE21 464 aa12.52□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A16PA6NEW6 464 aa12.52□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A20PA6NIJ5 464 aa12.52□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A8PA6NJQ4 464 aa12.52□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A7PA6NKC0 464 aa12.52□□□□□ -0.4
CDCA3-207ENST00000538862 FAM90A22PA8MWA6 464 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms