RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 MPPED1O15442 326 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 HEXAP06865 529 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 HAAOP46952 286 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 P2RY1P47900 373 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 GFRA1P56159 465 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 ARF1P84077 181 aaKnown RBP10.29□□□□□ -0.76
CPNE8-203ENST00000538596 TRA2AQ13595 282 aaKnown RBP eCLIP10.29□□□□□ -0.76
CPNE8-203ENST00000538596 TSC22D1Q15714 1073 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 IGFBP7Q16270 282 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 GUK1Q16774 197 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 SHEQ5VZ18 495 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 ZNF100Q8IYN0 542 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 EXTL1Q92935 676 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 SYT3Q9BQG1 590 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 PRRG4Q9BZD6 226 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 IL36GQ9NZH8 169 aa10.29□□□□□ -0.76
CPNE8-203ENST00000538596 C19orf67A6NJJ6 358 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 ZNF98A6NK75 572 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 CYTIPO60759 359 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 GLAP06280 429 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 SNRNP70P08621 437 aaKnown RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 CYB561P49447 251 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 PCBD1P61457 104 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 POLR2GP62487 172 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 FOXO1Q12778 655 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 RIPPLY2Q5TAB7 128 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TCEAL6Q6IPX3 200 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TMEM182Q6ZP80 229 aaPredicted RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 OR4D5Q8NGN0 318 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 CT55Q8WUE5 264 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TCEAL3Q969E4 200 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 GINS3Q9BRX5 216 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 ABHD14AQ9BUJ0 271 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 C1QTNF5Q9BXJ0 243 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 RGCCQ9H4X1 137 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 SPACA1Q9HBV2 294 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 NOSIPQ9Y314 301 aaKnown RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 FBXO7Q9Y3I1 522 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 NBEAQ8NFP9 2946 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 BORCS7-ASMTA0A0B4J1R7 106 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 IGKV1D-13A0A0B4J2D9 117 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 C5orf49A4QMS7 147 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 MRPL33O75394 65 aaKnown RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 IGKV1-13P0DP09 117 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 PPP1CCP36873 323 aaKnown RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 AWAT1Q58HT5 328 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TMEM211Q6ICI0 200 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 ZNF818PQ6ZRF7 136 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TBC1D26Q86UD7 250 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 PSMF1Q92530 271 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 CALHM2Q9HA72 323 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 C19orf12Q9NSK7 152 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TNFSF12O43508 249 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 NGFP01138 241 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 SEC11BP0C7V7 166 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TDGF1P13385 188 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 PRDX4Q13162 271 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 HABP2Q14520 560 aaPredicted RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 HERPUD1Q15011 391 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 CXorf66Q5JRM2 361 aaPredicted RBP10.28□□□□□ -0.76
CPNE8-203ENST00000538596 TUSC5Q8IXB3 177 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 C12orf57Q99622 126 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 R4GN57 208 aa10.28□□□□□ -0.76
CPNE8-203ENST00000538596 MED13Q9UHV7 2174 aa10.27□□□□□ -0.76
CPNE8-203ENST00000538596 IGSF23A1L1A6 192 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 HOXA1P49639 335 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 UCP3P55916 312 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 GPR157Q5UAW9 335 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 GAPTQ8N292 157 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 FAM213BQ8TBF2 198 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 CPNE4Q96A23 557 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 SPSB4Q96A44 273 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 BOD1Q96IK1 185 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 ZNF488Q96MN9 340 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 SIGLEC12Q96PQ1 595 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 OR51B6Q9H340 312 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 BIN3Q9NQY0 253 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 MTCH1Q9NZJ7 389 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 LUZP4Q9P127 313 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 LRFN1Q9P244 771 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 ZNF391Q9UJN7 358 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 UBE2J1Q9Y385 318 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 DSPP15924 2871 aaKnown RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 SPENQ96T58 3664 aaKnown RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 TTC28Q96AY4 2481 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 RPL36A-HNRNPH2H7BZ11 118 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 M0R036 132 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 HSD17B6O14756 317 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 GPR37O15354 613 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 SSSCA1O60232 199 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 DUSP3P51452 185 aaPredicted RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 IL13RA2Q14627 380 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 DCAF12Q5T6F0 453 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 WDR5BQ86VZ2 330 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 THOC3Q96J01 351 aaKnown RBP10.27□□□□□ -0.77
CPNE8-203ENST00000538596 RARRES2Q99969 163 aa10.27□□□□□ -0.77
CPNE8-203ENST00000538596 TMEM222Q9H0R3 208 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms