RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 TMEM165Q9HC07 324 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 DLL4Q9NR61 685 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 AK3Q9UIJ7 227 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A10PA6NDY2 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A18PA6NE21 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A16PA6NEW6 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A20PA6NIJ5 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A8PA6NJQ4 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A7PA6NKC0 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A22PA8MWA6 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A12PA8MX19 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A5PA8MXJ8 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A23PA8MXZ1 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 PPIHO43447 177 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 LANCL1O43813 399 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FCN3O75636 299 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 IGHV2-70P01814 119 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A15PP0C7V4 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A13PP0C7W8 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A14PP0C7W9 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM90A24PP0C7X0 464 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 MNDAP41218 407 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 NR4A2P43354 598 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 ATP5J2P56134 94 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 BAK1Q16611 211 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 PAN3Q58A45 887 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 Q6ZPA2 131 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 C17orf107Q6ZR85 190 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 LINC00596Q86U02 117 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 ZNRF1Q8ND25 227 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 OR4S1Q8NGB4 309 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 OR52I2Q8NH67 350 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 NUDT16L1Q9BRJ7 211 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 TMEM246Q9BRR3 403 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 DPCDQ9BVM2 203 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 IFT22Q9H7X7 185 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 MAB21L2Q9Y586 359 aa13.07□□□□□ -0.32
SFSWAP-206ENST00000537582 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 TNFRSF13BO14836 293 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 ZNF737O75373 536 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 SCGNO76038 276 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 CD3GP09693 182 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 MUC1P15941 1255 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 OR3A1P47881 315 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 ATXN7L3Q14CW9 347 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 FAM189A2Q15884 450 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 ASCC1Q8N9N2 400 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 PLPPR1Q8TBJ4 325 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 NARFLQ9H6Q4 476 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 CHODLQ9H9P2 273 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 HSF4Q9ULV5 492 aa13.06□□□□□ -0.32
SFSWAP-206ENST00000537582 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 TRAV38-1A0A0B4J264 116 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 LMO1P25800 156 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 HACD4Q5VWC8 232 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 NEK7Q8TDX7 302 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 MAFIPQ8WZ33 124 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 CCDC32Q9BV29 185 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 SHARPINQ9H0F6 387 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 CTSZQ9UBR2 303 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 KLK11Q9UBX7 282 aa13.05□□□□□ -0.32
SFSWAP-206ENST00000537582 TRAV39A0A0B4J263 110 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 MEX3AA1L020 520 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 PTTG1O95997 202 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 MELTFP08582 738 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 GSTP1P09211 210 aaKnown RBP13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 CSF3P09919 207 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 PRSS3P35030 304 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 ARFRP1Q13795 201 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 ZNF788Q6ZQV5 615 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 C5orf24Q7Z6I8 188 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 TRAPPC6BQ86SZ2 158 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 Q8N402 240 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 GVQW1Q8N7I0 195 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 TPRX1Q8N7U7 411 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 SDSLQ96GA7 329 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 POM121Q96HA1 1249 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 NEURL2Q9BR09 285 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 GLS2Q9UI32 602 aa13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 ZNF230Q9UIE0 474 aaPredicted RBP13.04□□□□□ -0.32
SFSWAP-206ENST00000537582 TMPRSS2O15393 492 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 ADAM20O43506 726 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 GNG2P59768 71 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 PITPNAQ00169 270 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 STEAP3Q658P3 488 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 OR8H2Q8N162 312 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 GPX8Q8TED1 209 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 TRIM63Q969Q1 353 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 SPACA1Q9HBV2 294 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 ABCB10Q9NRK6 738 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 CEACAM18A8MTB9 384 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 CTDSPLO15194 276 aa13.03□□□□□ -0.32
SFSWAP-206ENST00000537582 SIGLEC5O15389 551 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms