RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 DDAH2O95865 285 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 RENP00797 406 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 MMP9P14780 707 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF43P17038 809 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 LMO1P25800 156 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 GABRA2P47869 451 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 RRADP55042 308 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 PRDX1Q06830 199 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC22A6Q4U2R8 563 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 BOD1Q96IK1 185 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF845Q96IR2 970 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 MACROD1Q9BQ69 325 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 SF3B5Q9BWJ5 86 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 SRA1Q9HD15 236 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ZFP92A6NM28 416 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ARPC3O15145 178 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 IGHV4-34P06331 123 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 PVRP15151 417 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 DOK4Q8TEW6 326 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 LRRC61Q9BV99 259 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ELOVL3Q9HB03 270 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 TMEM74BQ9NUR3 256 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 RCL1Q9Y2P8 373 aaKnown RBP9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 TRAPPC1Q9Y5R8 145 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 CACNA1BQ00975 2339 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 IGLV3-19P01714 112 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 GLRA1P23415 457 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ATP6V0CP27449 155 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 CSNK2A1P68400 391 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SPSB3Q6PJ21 355 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 OR4N5Q8IXE1 308 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 CSNK2A3Q8NEV1 391 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC37A2Q8TED4 501 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ABHD6Q9BV23 337 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 OR10A5Q9H207 317 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 OR6C3Q9NZP0 311 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC45A2Q9UMX9 530 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 MRPS18BQ9Y676 258 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 C17orf105B2RV13 164 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 NRG2O14511 850 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 XRCC2O43543 280 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 H2BFMP0C1H6 154 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 RAB38P57729 211 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 CDC20BQ86Y33 519 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 LRRC25Q8N386 305 aaPredicted RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SMIM7Q9BQ49 75 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 PLXNA4Q9HCM2 1894 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF586Q9NXT0 402 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 CISD1Q9NZ45 108 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 KLHDC2Q9Y2U9 406 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 A0A1B0GWA3 101 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 PRR32B1ATL7 298 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 CTSVO60911 334 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 IL12BP29460 328 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 OR1D5P58170 312 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SPATA45Q537H7 98 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 TRMT12Q53H54 448 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 MFSD12Q6NUT3 480 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ABHD3Q8WU67 409 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 FAM216AQ8WUB2 273 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 LPAR4Q99677 370 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 HHLA2Q9UM44 414 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 FGF17O60258 216 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 NDUFB8O95169 186 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ABHD16AO95870 558 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 EMP2P54851 167 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SUPT4H1P63272 117 aaKnown RBP9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SMIM21Q3B7S5 101 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 BSXQ3C1V8 233 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 COX15Q7KZN9 410 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 LHFPL4Q7Z7J7 247 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC16A11Q8NCK7 471 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ADIPOR1Q96A54 375 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 BMFQ96LC9 184 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 PRSS50Q9UI38 385 aa9.53□□□□□ -0.88
CLSTN3-207ENST00000537408 MYO16Q9Y6X6 1858 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 NPIPA5A0A0B4J1W7 369 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 BPNT1O95861 308 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 FSTP19883 344 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 SRP14P37108 136 aaKnown RBP9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 GAB4Q2WGN9 574 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 GUSBP11Q6P575 273 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 OGFOD3Q6PK18 319 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 DPY19L4Q7Z388 723 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 SCNM1Q9BWG6 230 aa9.52□□□□□ -0.88
CLSTN3-207ENST00000537408 TRPM6Q9BX84 2022 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 AHCTF1Q8WYP5 2266 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A0A6YYD5 115 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 IGHV2OR16-5A0A0B4J2B6 119 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 A0A0J9YY10 115 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 ETV2O00321 342 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 SERPINA7P05543 415 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 DUSP1P28562 367 aa9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 HINT1P49773 126 aaPredicted RBP9.52□□□□□ -0.89
CLSTN3-207ENST00000537408 ABCA11PQ4W5N1 156 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms