RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 BCL7BQ9BQE9 202 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 NCOR1P1Q9H4R4 102 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 SCN3BQ9NY72 215 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 RSL24D1Q9UHA3 163 aaKnown RBP10.11□□□□□ -0.79
PRKDC-207ENST00000536483 CLEC2DQ9UHP7 191 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 GLS2Q9UI32 602 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 ZNF281Q9Y2X9 895 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 LINC00312Q9Y6C7 94 aa10.11□□□□□ -0.79
PRKDC-207ENST00000536483 SIRT4Q9Y6E7 314 aaPredicted RBP10.11□□□□□ -0.79
PRKDC-207ENST00000536483 hADV38S2A0JD32 116 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 SH2D1BO14796 132 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CSN2P05814 226 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CD2P06729 351 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CSF1P09603 554 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 MYL12AP19105 171 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 RAB3AP20336 220 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 TGFBR2P37173 567 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 POU3F4P49335 361 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 PAX5Q02548 391 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 KLRD1Q13241 179 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 DYNC1I2Q13409 638 aaKnown RBP10.1□□□□□ -0.79
PRKDC-207ENST00000536483 Q6P435 159 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 GDPD3Q7L5L3 318 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 TCF23Q7RTU1 214 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 BATF2Q8N1L9 274 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 PNKDQ8N490 385 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 ASCC1Q8N9N2 400 aaKnown RBP10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CHST4Q8NCG5 386 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 OR11H6Q8NGC7 330 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 OR4M1Q8NGD0 313 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 OR51T1Q8NGJ9 327 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 PPP1R35Q8TAP8 253 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CORO2AQ92828 525 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CPNE2Q96FN4 548 aaPredicted RBP10.1□□□□□ -0.79
PRKDC-207ENST00000536483 IL36RNQ9UBH0 155 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 CEPT1Q9Y6K0 416 aa10.1□□□□□ -0.79
PRKDC-207ENST00000536483 MEIOCA2RUB1 952 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 ODF3BA8MYP8 253 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 OR2H2O95918 312 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 CCL3L1P16619 93 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 PRKACAP17612 351 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 IGFBP3P17936 291 aaPredicted RBP10.09□□□□□ -0.79
PRKDC-207ENST00000536483 OR3A1P47881 315 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 MTNR1BP49286 362 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 TAS2R43P59537 309 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 RPS11P62280 158 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRKDC-207ENST00000536483 LSAMPQ13449 338 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 YIF1BQ5BJH7 314 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 HIST2H2BDQ6DRA6 164 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 SLC35E4Q6ICL7 350 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 OR4S1Q8NGB4 309 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 GHSRQ92847 366 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 PGLYRP3Q96LB9 341 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 SPACA5Q96QH8 159 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 PPA2Q9H2U2 334 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 CHCHD3Q9NX63 227 aaKnown RBP10.09□□□□□ -0.79
PRKDC-207ENST00000536483 IL36GQ9NZH8 169 aa10.09□□□□□ -0.79
PRKDC-207ENST00000536483 FUOMA2VDF0 154 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 G3V4G9 280 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 ANGPTL7O43827 346 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 PAHP00439 452 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 HCKP08631 526 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 OCM2P0CE71 109 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 OCMP0CE72 109 aaPredicted RBP10.08□□□□□ -0.8
PRKDC-207ENST00000536483 IGHV1-8P0DP01 117 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TMBIM6P55061 237 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 P2RX3P56373 397 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 BDH1Q02338 343 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 GRK1Q15835 563 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 NHLRC3Q5JS37 347 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 ZNF626Q68DY1 528 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 CDH26Q8IXH8 852 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 NANOGP1Q8N7R0 232 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 OR51A2Q8NGJ7 313 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 OR13D1Q8NGV5 346 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TSEN15Q8WW01 171 aaKnown RBP10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TMEM106AQ96A25 262 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 ZNF714Q96N38 554 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 CDCA4Q9BXL8 241 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 DUSP21Q9H596 190 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 IFT22Q9H7X7 185 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 EXOSC4Q9NPD3 245 aaKnown RBP10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TMEM138Q9NPI0 162 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TAS2R3Q9NYW6 316 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 FBLN5Q9UBX5 448 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
PRKDC-207ENST00000536483 UBE2J1Q9Y385 318 aaPredicted RBP10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TBL2Q9Y4P3 447 aaKnown RBP10.08□□□□□ -0.8
PRKDC-207ENST00000536483 TRBV5-7A0A0A0MS05 114 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 GABRPO00591 440 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 MAGEB3O15480 346 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 XPNPEP2O43895 674 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 NOL3O60936 208 aaKnown RBP10.07□□□□□ -0.8
PRKDC-207ENST00000536483 INMTO95050 263 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 CGB3P0DN86 165 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 CGB7P0DN87 165 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 TMEM225BP0DP42 221 aa10.07□□□□□ -0.8
PRKDC-207ENST00000536483 FSTP19883 344 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms