RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 YIF1BQ5BJH7 314 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF554Q86TJ5 538 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 NDUFA11Q86Y39 141 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 PIFOQ8TCI5 191 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 PPA2Q9H2U2 334 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 TMEM138Q9NPI0 162 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 FOXJ3Q9UPW0 622 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF281Q9Y2X9 895 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 STAB1Q9NY15 2570 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 F2RL2O00254 374 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 DEGS1O15121 323 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 CSF1P09603 554 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 CCL3L1P16619 93 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 POU3F4P49335 361 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 PPP3R1P63098 170 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 ZIK1Q3SY52 487 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-217ENST00000534699 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF565Q8N9K5 539 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 OR4S1Q8NGB4 309 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 UBE2FQ969M7 185 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 TMEM80Q96HE8 168 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 BARHL1Q9BZE3 327 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 VCXQ9H320 206 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 BABAM2Q9NXR7 383 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 GHRLQ9UBU3 117 aa8.4□□□□□ -1.06
CSDE1-217ENST00000534699 A0A0G2JK05 382 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 ODAMA1E959 279 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 HCKP08631 526 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 LIMS3P0CW19 117 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 LIMS4P0CW20 117 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 CGB3P0DN86 165 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 CGB7P0DN87 165 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 OMGP23515 440 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 C21orf33P30042 268 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-217ENST00000534699 TCF23Q7RTU1 214 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 REC114Q7Z4M0 266 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 OR52N4Q8NGI2 321 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 WIPF2Q8TF74 440 aaPredicted RBP8.4□□□□□ -1.07
CSDE1-217ENST00000534699 TSEN15Q8WW01 171 aaKnown RBP8.4□□□□□ -1.07
CSDE1-217ENST00000534699 SMIM19Q96E16 107 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 METTL9Q9H1A3 318 aa8.4□□□□□ -1.07
CSDE1-217ENST00000534699 TRBV5-5A0A0J9YX44 114 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 CASQ2O14958 399 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-217ENST00000534699 ZFPL1O95159 310 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 IGLV1-47P01700 117 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 TMEM225BP0DP42 221 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 GZMHP20718 246 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 SLC6A1P30531 599 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 MNDAP41218 407 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 RAB7AP51149 207 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 DHRSXQ8N5I4 330 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 OR9G1Q8NH87 305 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 FBLIM1Q8WUP2 373 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 APH1BQ8WW43 257 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 SLC29A1Q99808 456 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 CKLFQ9UBR5 152 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 SLC33A1O00400 549 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-217ENST00000534699 XPNPEP2O43895 674 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 MAPK3P27361 379 aaPredicted RBP8.39□□□□□ -1.07
CSDE1-217ENST00000534699 ADARB1P78563 741 aaKnown RBP8.39□□□□□ -1.07
CSDE1-217ENST00000534699 LY6G6FQ5SQ64 297 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 LHFPL3Q86UP9 236 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 OR8H3Q8N146 312 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 LINC00311Q8N616 119 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 OR4M1Q8NGD0 313 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 OR13C9Q8NGT0 318 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 CAPSLQ8WWF8 208 aa8.39□□□□□ -1.07
CSDE1-217ENST00000534699 RBFOX1Q9NWB1 397 aaKnown RBP8.39□□□□□ -1.07
CSDE1-217ENST00000534699 KBTBD11-OT1A0A1B0GTJ5 212 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 TOR1AO14656 332 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 ORC5O43913 435 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 PSPNO60542 156 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 WBP4O75554 376 aaKnown RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 OPN1MWP04001 364 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 LPLP06858 475 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 OPN1MW2P0DN77 364 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 OPN1MW3P0DN78 364 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 IGFBP3P17936 291 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 COX7A1P24310 79 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 NPBWR2P48146 333 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 CEBPDP49716 269 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 PDLIM3Q53GG5 364 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 KRBOX4Q5JUW0 171 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 KPRPQ5T749 579 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 NKAIN3Q8N8D7 197 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 GPR61Q9BZJ8 451 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF702PQ9H963 129 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 TNFRSF19Q9NS68 423 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 LRRC42Q9Y546 428 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 IGKV1-12A0A0C4DH73 117 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 NPIPB11E5RHQ5 1161 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 F8VVB4 439 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 F8VWA3 439 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 LY6LH3BQJ8 138 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 OR2F2O95006 317 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 IGKV1D-12P01611 117 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 BDKRB2P30411 391 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 RBM39Q14498 530 aaKnown RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 FAM189A2Q15884 450 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms