RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SLC7A10Q9NS82 523 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 SLC2A8Q9NY64 477 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RDH8Q9NYR8 311 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF581Q9P0T4 197 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 NOP16Q9Y3C1 178 aaKnown RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 FLVCR1Q9Y5Y0 555 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RFPL4AA6NLU0 287 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 FAM157AC9JC47 383 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 F5H5K5 113 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RFPL4AL1F8VTS6 287 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 LGALS8O00214 317 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 LILRA1O75019 489 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RP2O75695 350 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 B3GALNT1O75752 331 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 IGLV3-1P01715 115 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ERCC1P07992 297 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 DAOP14920 347 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 FAHP16930 419 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 PI3P19957 117 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 CD34P28906 385 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 CAPZA1P52907 286 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ATP1B3P54709 279 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 HGFACQ04756 655 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ATXN7L3Q14CW9 347 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 UBE2V2Q15819 145 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ADIPOQQ15848 244 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 C3orf36Q3SXR2 165 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 FAM74A1Q5RGS3 127 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RAB12Q6IQ22 244 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 GSG1LQ6UXU4 331 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 SLC25A42Q86VD7 318 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 MARCH1Q8TCQ1 289 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 CASTOR1Q8WTX7 329 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 RBPMSQ93062 196 aaKnown RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM45BQ96B21 275 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ARHGAP5-AS1Q96IT6 56 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 NAA11Q9BSU3 229 aaPredicted RBP6.98□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF224Q9NZL3 707 aa6.98□□□□□ -1.29
NEDD8-207ENST00000533242 IGHV1-18A0A0C4DH31 117 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 LOC102725191A0A1B0GVB3 256 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 hCG_1807616A0A1W2PRN6 198 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 C9orf170A2RU37 121 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 RNF222A6NCQ9 220 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 MFSD2BA6NFX1 497 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 OR5H14A6NHG9 310 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 SIGLEC5O15389 551 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 HCKP08631 526 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 RPA2P15927 270 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 AKR1C4P17516 323 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 SLC35A1P78382 337 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 BAMBIQ13145 260 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 SNAI3Q3KNW1 292 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 TSPO2Q5TGU0 170 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 LYG2Q86SG7 212 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 BHLHE23Q8NDY6 225 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 OR9K2Q8NGE7 335 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 OR1S1Q8NH92 325 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 LRRC20Q8TCA0 184 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 CCDC107Q8WV48 283 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 PPP1R1CQ8WVI7 109 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF75AQ96N20 296 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 MOB1AQ9H8S9 216 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 SDHAF2Q9NX18 166 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 FBLN5Q9UBX5 448 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF107Q9UII5 783 aaPredicted RBP6.97□□□□□ -1.29
NEDD8-207ENST00000533242 KIF25Q9UIL4 384 aa6.97□□□□□ -1.29
NEDD8-207ENST00000533242 MPTX1A8MV57 137 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 DISC1C4P0D8 188 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 MFNGO00587 321 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 EIF1BO60739 113 aaKnown RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 CRTAPO75718 401 aaPredicted RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 CRYAAP02489 173 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 OR4A8P0C604 315 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 PATE4P0C8F1 98 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 HIST1H1DP16402 221 aaKnown RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 MSR1P21757 451 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 VAMP1P23763 118 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 SLC6A9P48067 706 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 CSNK1A1P48729 337 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 RAB14P61106 215 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 GK2Q14410 553 aaPredicted RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF546Q86UE3 836 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 OR2AE1Q8NHA4 323 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 ZNF418Q8TF45 676 aaPredicted RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 FAM216AQ8WUB2 273 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 MITD1Q8WV92 249 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM54Q969K7 222 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM230Q96A57 120 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 RAB3CQ96E17 227 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 PRRT1Q99946 306 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 TMEM59Q9BXS4 323 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 MS4A7Q9GZW8 240 aaPredicted RBP6.96□□□□□ -1.29
NEDD8-207ENST00000533242 IFT46Q9NQC8 304 aa6.96□□□□□ -1.29
NEDD8-207ENST00000533242 IGKV1D-8A0A087WSZ0 117 aa6.96□□□□□ -1.3
NEDD8-207ENST00000533242 FOXI3A8MTJ6 420 aaPredicted RBP6.96□□□□□ -1.3
NEDD8-207ENST00000533242 TRIM77I1YAP6 450 aa6.96□□□□□ -1.3
NEDD8-207ENST00000533242 ACKR3P25106 362 aa6.96□□□□□ -1.3
NEDD8-207ENST00000533242 MPZP25189 248 aa6.96□□□□□ -1.3
NEDD8-207ENST00000533242 OTX1P32242 354 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms