RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LEUTXA8MZ59 168 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 I3L521 148 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 SAP18O00422 153 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 FABP7O15540 132 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TCF21O43680 179 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 DUSP11O75319 330 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 OR7C1O76099 320 aaPredicted RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 LSM8O95777 96 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 HBE1P02100 147 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 UBBP0CG47 229 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 HIST1H1BP16401 226 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 ZNF30P17039 623 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 NELFEP18615 380 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 RAB3BP20337 219 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TAC1P20366 129 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 CD34P28906 385 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ADORA2BP29275 332 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 RPL12P30050 165 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 CMPK1P30085 196 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 PYCR1P32322 319 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 RPL4P36578 427 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 OPRD1P41143 372 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 EVX1P49640 407 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 EMDP50402 254 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 RPL27P61353 136 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 COPZ1P61923 177 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 OC90Q02509 493 aaPredicted RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 TGFBR3Q03167 851 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ECH1Q13011 328 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 UNC119Q13432 240 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 GNMTQ14749 295 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 C16orf72Q14CZ0 275 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 OXA1LQ15070 435 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 C17orf58Q2M2W7 97 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 HLA-DRB5Q30154 266 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TP53I3Q53FA7 332 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 CARD16Q5EG05 197 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 PABPC1L2AQ5JQF8 200 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 AKR1C8PQ5T2L2 129 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TMEM78Q5T7P6 136 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 CPTPQ5TA50 214 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ZFAND6Q6FIF0 208 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 STEAP1BQ6NZ63 245 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 HAGHLQ6PII5 290 aaPredicted RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 TBPL2Q6SJ96 375 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ATRAIDQ6UW56 229 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TEX261Q6UWH6 196 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ZNF730Q6ZMV8 503 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 Q6ZRG5 221 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 Q6ZT83 130 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 SLC16A13Q7RTY0 426 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 DOLPP1Q86YN1 238 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 PDZD9Q8IXQ8 264 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 C4orf33Q8N1A6 199 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 CHST4Q8NCG5 386 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 OR8G5Q8NG78 346 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 OR5K2Q8NHB8 316 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 SPPL2BQ8TCT7 592 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ZFP90Q8TF47 636 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ORAOV1Q8WV07 137 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 PCNPQ8WW12 178 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 RDH5Q92781 318 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ARL11Q969Q4 196 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 MRPL24Q96A35 216 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 PNPLA2Q96AD5 504 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 GALMQ96C23 342 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TM4SF18Q96CE8 201 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 KLF6Q99612 283 aaPredicted RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 ZNF184Q99676 751 aaPredicted RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 FAIM2Q9BWQ8 316 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TAPBPLQ9BX59 468 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 HCAR1Q9BXC0 346 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 MROQ9BYG7 248 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TMEM126AQ9H061 195 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 SLC25A51Q9H1U9 297 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ABCG5Q9H222 651 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 DCSTAMPQ9H295 470 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 PRORYQ9H606 182 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 ZNF385DQ9H6B1 395 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 EXOSC4Q9NPD3 245 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 KCNJ16Q9NPI9 418 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 STARD5Q9NSY2 213 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 HRASLS2Q9NWW9 162 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 MED11Q9P086 117 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 METTL1Q9UBP6 276 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 PYCARDQ9ULZ3 195 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 TRAPPC4Q9Y296 219 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 UTP11Q9Y3A2 253 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 AK6Q9Y3D8 172 aaKnown RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 IGSF9BQ9UPX0 1349 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 NOS1P29475 1434 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 MED14O60244 1454 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 POLA1P09884 1462 aaPredicted RBP2.56□□□□□ -2
PTPRK-220ENST00000531466 CASZ1Q86V15 1759 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 AK9Q5TCS8 1911 aa2.56□□□□□ -2
PTPRK-220ENST00000531466 A0A1B0GV50 99 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 A0A1B0GW55 424 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 MAP1LC3B2A6NCE7 125 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 F5H5K5 113 aa2.55□□□□□ -2
PTPRK-220ENST00000531466 H3BQF6 201 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms