RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TPRX1Q8N7U7 411 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 MAFIPQ8WZ33 124 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 GAFA1Q96PS6 74 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 TMEM165Q9HC07 324 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 ZNF701Q9NV72 531 aaPredicted RBP8.89□□□□□ -0.99
SOX6-213ENST00000530378 RASL12Q9NYN1 266 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 AK3Q9UIJ7 227 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 DSCAML1Q8TD84 2053 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 TRAV39A0A0B4J263 110 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 TRAV38-1A0A0B4J264 116 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 NKX6-3A6NJ46 265 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 MFNGO00587 321 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 HLA-DQB1P01920 261 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 CHRM2P08172 466 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 FUT3P21217 361 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 MDH2P40926 338 aaKnown RBP8.89□□□□□ -0.99
SOX6-213ENST00000530378 MNDAP41218 407 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 RANBP1P43487 201 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 ARFRP1Q13795 201 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 MPV17LQ2QL34 196 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 PEG10Q86TG7 708 aaKnown RBP8.89□□□□□ -0.99
SOX6-213ENST00000530378 OR4S1Q8NGB4 309 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 PLPPR1Q8TBJ4 325 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 SETD6Q8TBK2 473 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 TIMD4Q96H15 378 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 LURAP1Q96LR2 239 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 CMTM3Q96MX0 182 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 BPESC1Q9GZL8 116 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 GLS2Q9UI32 602 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
SOX6-213ENST00000530378 YLPM1P49750 1951 aaKnown RBP8.88□□□□□ -0.99
SOX6-213ENST00000530378 ITPR3Q14573 2671 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 MALRD1Q5VYJ5 2156 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 WNK2Q9Y3S1 2297 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 CEACAM18A8MTB9 384 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 IFNL4K9M1U5 179 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 INHBBP09529 407 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 MUC1P15941 1255 aaPredicted RBP8.88□□□□□ -0.99
SOX6-213ENST00000530378 OR3A1P47881 315 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 GNG2P59768 71 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 SEC61A1P61619 476 aaKnown RBP8.88□□□□□ -0.99
SOX6-213ENST00000530378 GRK1Q15835 563 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 ZNF260Q3ZCT1 412 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 C17orf107Q6ZR85 190 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 C5orf24Q7Z6I8 188 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 CCDC107Q8WV48 283 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 RAB1CQ92928 201 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 RHOFQ9HBH0 211 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 CHMP1AQ9HD42 196 aaPredicted RBP8.88□□□□□ -0.99
SOX6-213ENST00000530378 RCC2Q9P258 522 aaKnown RBP8.88□□□□□ -0.99
SOX6-213ENST00000530378 CTSZQ9UBR2 303 aa8.88□□□□□ -0.99
SOX6-213ENST00000530378 ZNF230Q9UIE0 474 aaPredicted RBP8.88□□□□□ -0.99
SOX6-213ENST00000530378 CREBBPQ92793 2442 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 AKAP9Q99996 3911 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 IGHV4-30-2A0A087WSY4 118 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 LINC00854A0A1B0GVQ3 168 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 MCRIP1C9JLW8 97 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 SSX5O60225 188 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FCN3O75636 299 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 CD3GP09693 182 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 RPS2P15880 293 aaKnown RBP8.87□□□□□ -0.99
SOX6-213ENST00000530378 NDUFB7P17568 137 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 PDLIM4P50479 330 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 IL13RA1P78552 427 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 MRPS11P82912 194 aaKnown RBP8.87□□□□□ -0.99
SOX6-213ENST00000530378 AESQ08117 197 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 DEFB113Q30KQ7 82 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 CLEC2AQ6UVW9 174 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 TRAPPC6BQ86SZ2 158 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 LINC00596Q86U02 117 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 OR52I2Q8NH67 350 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 UBALD1Q8TB05 177 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 S100ZQ8WXG8 99 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 ST8SIA4Q92187 359 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM168AQ92567 244 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 SDHCQ99643 169 aaPredicted RBP8.87□□□□□ -0.99
SOX6-213ENST00000530378 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 SRRQ9GZT4 340 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 ZNF665Q9H7R5 613 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 ETAA1Q9NY74 926 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 PRRC2AP48634 2157 aaKnown RBP8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A10PA6NDY2 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A20PA6NIJ5 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A7PA6NKC0 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A22PA8MWA6 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A12PA8MX19 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A23PA8MXZ1 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 LANCL1O43813 399 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 ZNF737O75373 536 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 SCGNO76038 276 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A13PP0C7W8 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 FAM90A24PP0C7X0 464 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 ETV6P41212 452 aa8.87□□□□□ -0.99
SOX6-213ENST00000530378 EDDM3BP56851 147 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms